BLASTX nr result

ID: Atractylodes21_contig00045003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045003
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   139   3e-31
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   131   5e-29
emb|CAJ65869.1| putative integrase [Cucumis melo]                     130   1e-28
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   129   2e-28
emb|CAJ65876.1| putative integrase [Cucumis melo]                     129   2e-28

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  139 bits (349), Expect = 3e-31
 Identities = 62/97 (63%), Positives = 77/97 (79%)
 Frame = -3

Query: 291  KDITAMVQQCDICQMSKNLRGSPAGLLQPLPLSWKVWEEVTMDFIEGLPVSQGMNAILVV 112
            KD+T  VQ C ICQ  K    SPAGLLQPLP+   +WE+++MDF+EGLP SQG + ILVV
Sbjct: 1139 KDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVV 1198

Query: 111  IDRLSKYAHFIGLKHPYTAQSVAEIFVKEIIRLHGVP 1
            +DRLSKYAHFI LKHP+TA +VA +F+KEI++LHG P
Sbjct: 1199 VDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGFP 1235


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  131 bits (330), Expect = 5e-29
 Identities = 54/97 (55%), Positives = 79/97 (81%)
 Frame = -3

Query: 291  KDITAMVQQCDICQMSKNLRGSPAGLLQPLPLSWKVWEEVTMDFIEGLPVSQGMNAILVV 112
            +D+   +Q+C +CQ +K    +PAGLLQPLP+   +WE+V+MDF+EGLP S G ++ILVV
Sbjct: 975  QDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSILVV 1034

Query: 111  IDRLSKYAHFIGLKHPYTAQSVAEIFVKEIIRLHGVP 1
            +DRLSKY HFIGL+HP++A +VA++F+KE+++LHG P
Sbjct: 1035 VDRLSKYGHFIGLRHPFSAATVAQVFIKEVVKLHGFP 1071


>emb|CAJ65869.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/97 (59%), Positives = 76/97 (78%)
 Frame = -3

Query: 291 KDITAMVQQCDICQMSKNLRGSPAGLLQPLPLSWKVWEEVTMDFIEGLPVSQGMNAILVV 112
           KDI   V  C +CQ +K    SPAGLLQPLP+  ++WE+++MDF+EGLP S+G + ILVV
Sbjct: 4   KDIKQYVDHCHVCQQNKTQALSPAGLLQPLPIPNRIWEDISMDFVEGLPCSKGFDTILVV 63

Query: 111 IDRLSKYAHFIGLKHPYTAQSVAEIFVKEIIRLHGVP 1
           +DRLSKYAHFI L HP++A+ VA +FVKE++RLHG P
Sbjct: 64  VDRLSKYAHFITLGHPFSAKVVALVFVKEVVRLHGYP 100


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  129 bits (325), Expect = 2e-28
 Identities = 55/91 (60%), Positives = 75/91 (82%)
 Frame = -3

Query: 273  VQQCDICQMSKNLRGSPAGLLQPLPLSWKVWEEVTMDFIEGLPVSQGMNAILVVIDRLSK 94
            V+ CD CQ  K L  SP GLLQPLP+  ++WE+++MDFI GLP S+G  A+LVV+DRLSK
Sbjct: 904  VRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSK 963

Query: 93   YAHFIGLKHPYTAQSVAEIFVKEIIRLHGVP 1
            Y+HFI LKHPYTA+ +A++F++E++RLHG+P
Sbjct: 964  YSHFILLKHPYTAKVIADVFIREVVRLHGIP 994


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/97 (59%), Positives = 76/97 (78%)
 Frame = -3

Query: 291 KDITAMVQQCDICQMSKNLRGSPAGLLQPLPLSWKVWEEVTMDFIEGLPVSQGMNAILVV 112
           KDI   V  C +CQ +K    SPAGLLQPLP+  ++WE+++MDF+EGLP S+G + ILVV
Sbjct: 4   KDIKQYVDHCHVCQQNKTQALSPAGLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTILVV 63

Query: 111 IDRLSKYAHFIGLKHPYTAQSVAEIFVKEIIRLHGVP 1
           +DRLSKYAHFI L HP++A+ VA +FVKE++RLHG P
Sbjct: 64  VDRLSKYAHFITLGHPFSAKVVALVFVKEVVRLHGYP 100