BLASTX nr result

ID: Atractylodes21_contig00044988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044988
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220...    63   2e-08
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    62   4e-08
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...    61   1e-07
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    60   2e-07
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    60   2e-07

>ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
          Length = 2047

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = -2

Query: 149  ELEGLLNEFEDVFATPTTLPPKRELDHSITLLQGSNPVNLKAYRY 15
            E+E L NEFEDVF  P  LPP R++DH I L +G+NP+N++ YRY
Sbjct: 890  EIEQLQNEFEDVFVMPNRLPPMRQIDHKIQLKEGTNPINVRPYRY 934


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = -2

Query: 260  LVANQSYLIDSPKGLSEFWSLTLDGSNVGILSDNQRRELEGLLNEFEDVFATPTTLPPKR 81
            L  +Q Y   S +GL + ++L  + S+   + DN    ++ LL  F DVF  P  LPP R
Sbjct: 886  LELHQLYQSGSIEGLVQLYTLDSESSSDLPIPDN----IQQLLQSFADVFQEPQGLPPVR 941

Query: 80   ELDHSITLLQGSNPVNLKAYRYGALQ 3
            E DH+I L+ G+ PVN++ YRY  LQ
Sbjct: 942  EYDHTIPLIPGAQPVNVRPYRYTPLQ 967


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -2

Query: 146 LEGLLNEFEDVFATPTTLPPKRELDHSITLLQGSNPVNLKAYRY 15
           ++ +LNEF+++F+ PT LPPKR  DH I L++G+ PVNL+ YRY
Sbjct: 604 VQPILNEFQEIFSEPTELPPKRNCDHHIPLVEGAKPVNLRPYRY 647


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/51 (43%), Positives = 39/51 (76%)
 Frame = -2

Query: 155 RRELEGLLNEFEDVFATPTTLPPKRELDHSITLLQGSNPVNLKAYRYGALQ 3
           ++EL+ L+  F+D+F  P+ LPP+R+++H ITL +G++P+N++ YRY   Q
Sbjct: 421 QQELKELIEAFDDIFQAPSQLPPQRDIEHQITLKEGTDPINVRPYRYAYFQ 471


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/51 (43%), Positives = 39/51 (76%)
 Frame = -2

Query: 155 RRELEGLLNEFEDVFATPTTLPPKRELDHSITLLQGSNPVNLKAYRYGALQ 3
           ++EL+ L+  F+D+F  P+ LPP+R+++H ITL +G++P+N++ YRY   Q
Sbjct: 409 QQELKELIEAFDDIFQAPSQLPPQRDIEHQITLKEGTDPINVRPYRYAYFQ 459


Top