BLASTX nr result

ID: Atractylodes21_contig00044903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044903
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      77   1e-12
ref|XP_002529794.1| hypothetical protein RCOM_0251410 [Ricinus c...    75   4e-12
ref|XP_002528289.1| hypothetical protein RCOM_0456620 [Ricinus c...    73   2e-11
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    70   2e-10
ref|XP_002510045.1| conserved hypothetical protein [Ricinus comm...    68   9e-10

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 29/55 (52%), Positives = 42/55 (76%)
 Frame = +3

Query: 189 LVNRMTKLEFPSFDGEAFKDWHYKCNQFFELDNTPEDMKVRLVSIHLKGRALQWH 353
           L+ R++K+ FPSFDG   + W Y+C QFF LD TP +M+VR  S+H++G+AL+WH
Sbjct: 170 LITRLSKVGFPSFDGNGLRGWLYRCEQFFSLDGTPPEMRVRYASMHMEGKALEWH 224


>ref|XP_002529794.1| hypothetical protein RCOM_0251410 [Ricinus communis]
           gi|223530738|gb|EEF32608.1| hypothetical protein
           RCOM_0251410 [Ricinus communis]
          Length = 295

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = +3

Query: 165 TKNTQGYQLVNRMTKLEFPSFDGEAFKDWHYKCNQFFELDNTPEDMKVRLVSIHLKGRAL 344
           T NT  Y L +R TK+EFP F GE  + W +K ++FF++D TP + +V+L  IHL+GRAL
Sbjct: 100 TGNTN-YHLASRFTKVEFPRFGGEDVEGWLFKYDRFFQIDQTPSNSQVKLALIHLEGRAL 158

Query: 345 QWHQ 356
           QWHQ
Sbjct: 159 QWHQ 162


>ref|XP_002528289.1| hypothetical protein RCOM_0456620 [Ricinus communis]
           gi|223532289|gb|EEF34091.1| hypothetical protein
           RCOM_0456620 [Ricinus communis]
          Length = 247

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 28/53 (52%), Positives = 41/53 (77%)
 Frame = +3

Query: 198 RMTKLEFPSFDGEAFKDWHYKCNQFFELDNTPEDMKVRLVSIHLKGRALQWHQ 356
           R+ K+EFP FDG   + W +KC++FF++D TP   KV+L +IH++GRALQWH+
Sbjct: 4   RVAKIEFPRFDGSELEGWLFKCDRFFQIDYTPTHAKVKLAAIHMEGRALQWHK 56


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
 Frame = +3

Query: 132 NMEDEDGSPSKTKNTQ----------GYQLVNRMTKLEFPSFDGEAFKDWHYKCNQFFEL 281
           +ME+  G P   ++ +           Y  + R+ K++FP FDG   K+W +K  +FF +
Sbjct: 76  SMENRSGYPDPYRDARHQQVRSDHFNAYNNLTRLGKIDFPRFDGTRLKEWLFKVEEFFGV 135

Query: 282 DNTPEDMKVRLVSIHLKGRALQWHQ 356
           D+TPEDMKV++ +IH    A  WHQ
Sbjct: 136 DSTPEDMKVKMAAIHFDSHASTWHQ 160


>ref|XP_002510045.1| conserved hypothetical protein [Ricinus communis]
           gi|223550746|gb|EEF52232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/95 (36%), Positives = 53/95 (55%)
 Frame = +3

Query: 63  AQGKKAIKEPDPLLGYKVDDGETNMEDEDGSPSKTKNTQGYQLVNRMTKLEFPSFDGEAF 242
           A  K A  + +P L  K     T+   +  S +   N   YQ+  R+TK+EF  FD E  
Sbjct: 40  ANEKNATNDQNPALA-KNAHPFTSFFIDLASQTPIPNNNNYQMATRVTKIEFSRFDEEDL 98

Query: 243 KDWHYKCNQFFELDNTPEDMKVRLVSIHLKGRALQ 347
           + W +KC  FF+ D TP + +V+L +IH++G+ALQ
Sbjct: 99  EGWLFKCELFFQFDFTPSNARVKLAAIHMEGKALQ 133


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