BLASTX nr result

ID: Atractylodes21_contig00044875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044875
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    86   4e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    82   6e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    81   1e-13
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    62   4e-08
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    60   1e-07

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = +2

Query: 53  TSAIPPVQATTPYHRSAISSNS--KVGGAMPSGNAMGEVRRLTDKELQAKRERGLCFRCD 226
           T   P  Q   P H S+ S NS  K    +P     GE+RRL++KELQ KRE GLCFRCD
Sbjct: 296 THNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPFGEIRRLSEKELQYKREHGLCFRCD 355

Query: 227 EKWNVGHRCKRRELSVVV 280
           EKW +GHRCK++ELS+++
Sbjct: 356 EKWAIGHRCKKKELSILL 373


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
 Frame = +2

Query: 17  TPINQSRSSIQATSAIPPVQATTP---YHRSAISSNSKVGGAMPSGNAMGEVRRLTDKEL 187
           TP +      Q  + +PP     P   +   +I S +K    +P     GE+RRL++KEL
Sbjct: 240 TPNSSQTFRTQTQTYLPPKHPAPPQSVFSSPSIVSPAKTKTHIPIARPYGEIRRLSEKEL 299

Query: 188 QAKRERGLCFRCDEKWNVGHRCKRRELSVVV 280
           Q KRERGLCFRCD+KW+VGHRCK +ELSV++
Sbjct: 300 QHKRERGLCFRCDDKWSVGHRCK-KELSVLL 329


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
 Frame = +2

Query: 107 SSNSKVGGAMP---SGNAMGEVRRLTDKELQAKRERGLCFRCDEKWNVGHRCKRRELSVV 277
           +S + V  A P   S    GE+RRLT+KELQ KR +GLCF+CDEKW VGH+C+R+ELSV+
Sbjct: 379 ASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVL 438

Query: 278 VIQD 289
            ++D
Sbjct: 439 FMED 442


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/59 (44%), Positives = 43/59 (72%)
 Frame = +2

Query: 161 VRRLTDKELQAKRERGLCFRCDEKWNVGHRCKRRELSVVVIQDXXXXXXXXXDQADILE 337
           ++RLT+ ELQA+RE+G+CF+CDEK+++GHRCK +EL V+++ +         D+   +E
Sbjct: 178 IKRLTESELQARREKGICFKCDEKFSLGHRCK-KELRVLLVHEDEREEDNQFDERATME 235


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 98  SAISSNSKVGGAMPSGNAMGEVRRLTDKELQAKRERGLCFRCDEKWNVGHRCKRRELSVV 277
           S  S +  VGG    G      RR  D +LQA++E+GLC+RCD+ ++ GHRCK REL + 
Sbjct: 271 SNTSQSHTVGGG---GRREPSYRRWIDSKLQARKEKGLCYRCDKPFSKGHRCKNRELKLC 327

Query: 278 VIQD 289
           V+ D
Sbjct: 328 VVAD 331


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