BLASTX nr result

ID: Atractylodes21_contig00044828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044828
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 hom...    76   8e-12
ref|XP_002313923.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    72   1e-10
ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 hom...    72   1e-10
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               72   1e-10

>ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine max]
          Length = 1072

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = -1

Query: 709  NLKLVFDELQXXXXXXXXXXXXXXXRLADDFYVXXXXXXXXXXXSRWEDFKPLFEDRLES 530
            NLKLVFDEL                RLADDF+            S+WED +PL ED  E 
Sbjct: 791  NLKLVFDELLERVKEKEEKEAKKRKRLADDFFHLLHSTKDFTVSSKWEDCRPLVEDSQEF 850

Query: 529  WFTVEESFCREIFDKYIAELKK--ARDERKHREDKAKKSVDRDRR 401
                +ES C+E+F++YIA+LK+    +ERK +E++AKK  DR+ R
Sbjct: 851  RSIGDESLCKEVFEEYIAQLKEEAKENERKRKEERAKKEKDREER 895


>ref|XP_002313923.1| predicted protein [Populus trichocarpa] gi|222850331|gb|EEE87878.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = -1

Query: 712 VNLKLVFDELQXXXXXXXXXXXXXXXRLADDFYVXXXXXXXXXXXSRWEDFKPLFEDRLE 533
           VNLK+VFDEL                RLADDF             S+WE FK +FE   E
Sbjct: 452 VNLKMVFDELLERAREKEEKEAKKRKRLADDFLNLLQSIKDITASSKWESFKEIFEGSQE 511

Query: 532 SWFTVEESFCREIFDKYIAELK--KARDERKHREDKAKKSVDRDRR 401
                EE+FCRE+F++YI++LK  +  +ERK +E+KAKK  +R+ R
Sbjct: 512 YSSIGEEAFCREMFEEYISQLKEQEKENERKQKEEKAKKEKEREER 557


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/106 (45%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = -1

Query: 712  VNLKLVFDELQXXXXXXXXXXXXXXXRLADDFYVXXXXXXXXXXXSRWEDFKPLFEDRLE 533
            VNLKLVF+EL                RLADDF             S WED KPLFE+  E
Sbjct: 778  VNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQE 837

Query: 532  SWFTVEESFCREIFDKYIAEL-KKARD-ERKHREDKAKKSVDRDRR 401
                 EESF REIF++YIA L +KA++ ERK  E+KAKK  +R+ +
Sbjct: 838  YRSIGEESFGREIFEEYIAHLQEKAKEKERKREEEKAKKEKEREEK 883


>ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max]
          Length = 1017

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -1

Query: 709  NLKLVFDELQXXXXXXXXXXXXXXXRLADDFYVXXXXXXXXXXXSRWEDFKPLFEDRLES 530
            NLKLVFDEL                RL+DDF+             +WED +P  ED  E 
Sbjct: 790  NLKLVFDELLERAKEKEEKEAKKRKRLSDDFFHLLHSTKDITVSLKWEDCRPHVEDSQEF 849

Query: 529  WFTVEESFCREIFDKYIAELKK--ARDERKHREDKAKKSVDRDRR 401
                +ES C+E+F++YIA+LK+     ERK +E++AKK  DR+ R
Sbjct: 850  RSIGDESLCKEVFEEYIAQLKEEAKESERKRKEERAKKEKDREER 894


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/106 (45%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = -1

Query: 712  VNLKLVFDELQXXXXXXXXXXXXXXXRLADDFYVXXXXXXXXXXXSRWEDFKPLFEDRLE 533
            VNLKLVF+EL                RLADDF             S WED KPLFE+  E
Sbjct: 788  VNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQE 847

Query: 532  SWFTVEESFCREIFDKYIAEL-KKARD-ERKHREDKAKKSVDRDRR 401
                 EESF REIF++YIA L +KA++ ERK  E+KAKK  +R+ +
Sbjct: 848  YRSIGEESFGREIFEEYIAHLQEKAKEKERKREEEKAKKEKEREEK 893


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