BLASTX nr result

ID: Atractylodes21_contig00044677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044677
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    147   7e-34
emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]   132   4e-29
gb|AEL30354.1| retrotransposon gag protein [Arachis hypogaea]         115   4e-24
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   112   4e-23
gb|AAB18645.1| unknown [Hordeum vulgare]                              111   7e-23

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/119 (56%), Positives = 88/119 (73%)
 Frame = +2

Query: 2   SLRDRARDWLNALPSDSITTWDNLAEKFLLKYFPPTKNARLRNAINTFKQNDGESLWEVW 181
           SLRD+AR WL +LP  SITTWD L+E FL KYFPP+K A+LRN I TF Q +GESL++ W
Sbjct: 17  SLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTFTQKEGESLYDAW 76

Query: 182 ERFKELLRKCPLHGISDWIQMEIFYNGLDPKTRSAVDYSAGGALLDRTYDDCIVILDRM 358
           ER+K+LLR CP HG+ DW+ +  FYNGL   TR  VD +AGGAL++++  D   +++ M
Sbjct: 77  ERYKDLLRMCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGGALMNKSVRDAKQLIEDM 135


>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/111 (52%), Positives = 80/111 (72%)
 Frame = +2

Query: 2   SLRDRARDWLNALPSDSITTWDNLAEKFLLKYFPPTKNARLRNAINTFKQNDGESLWEVW 181
           SL ++A+ WL +LP  +ITTWD L   FL KYFP  K+ ++RN I  F Q D ESL+E W
Sbjct: 40  SLNNKAKAWLISLPPGTITTWDGLVNAFLAKYFPLAKSTKMRNDITNFLQQDQESLYEAW 99

Query: 182 ERFKELLRKCPLHGISDWIQMEIFYNGLDPKTRSAVDYSAGGALLDRTYDD 334
           ERFK+LLRKCP HG+  W+Q ++FYN L P T++ VD ++GGA +++T D+
Sbjct: 100 ERFKDLLRKCPHHGLPIWMQAQMFYNSLHPNTQTMVDAASGGAFINKTPDE 150


>gb|AEL30354.1| retrotransposon gag protein [Arachis hypogaea]
          Length = 920

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/104 (48%), Positives = 73/104 (70%)
 Frame = +2

Query: 2   SLRDRARDWLNALPSDSITTWDNLAEKFLLKYFPPTKNARLRNAINTFKQNDGESLWEVW 181
           +LRD+A+ WL++ P +S+ TW+ +  KFL K+FPP K  +LR  + TFKQ DGE+L+E W
Sbjct: 205 ALRDKAKLWLDSQPKESLNTWEKVVTKFLTKFFPPKKLTKLRLEVQTFKQKDGETLYEAW 264

Query: 182 ERFKELLRKCPLHGISDWIQMEIFYNGLDPKTRSAVDYSAGGAL 313
           ER+K L R+CP    S W Q++IFY GL   ++ ++D SAG +L
Sbjct: 265 ERYKLLTRQCPPDMFSKWTQLDIFYEGLGEMSKMSLDTSAGSSL 308


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/119 (45%), Positives = 79/119 (66%)
 Frame = +2

Query: 2   SLRDRARDWLNALPSDSITTWDNLAEKFLLKYFPPTKNARLRNAINTFKQNDGESLWEVW 181
           SLRD+A    N LPS +ITTW  L + FL+K++P  K A +R+AI TF Q+ GESL+E W
Sbjct: 89  SLRDKALFCYNKLPS-TITTWPELFKIFLIKWYPYQKTADMRHAIVTFTQDPGESLYEAW 147

Query: 182 ERFKELLRKCPLHGISDWIQMEIFYNGLDPKTRSAVDYSAGGALLDRTYDDCIVILDRM 358
           ERFK+L R CP HG+  W   +IFY  +D  TR  +D ++GG  +D+  ++   +L+++
Sbjct: 148 ERFKDLQRLCPHHGLDQWYLCQIFYTRVDADTRRVIDGASGGFFMDKAIEEGYELLEKL 206


>gb|AAB18645.1| unknown [Hordeum vulgare]
          Length = 337

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/119 (42%), Positives = 76/119 (63%)
 Frame = +2

Query: 2   SLRDRARDWLNALPSDSITTWDNLAEKFLLKYFPPTKNARLRNAINTFKQNDGESLWEVW 181
           SLRDRA+ W ++LP  SI +WD   + ++ KYFPP K   LRN I  FKQ D E + + W
Sbjct: 87  SLRDRAKTWFSSLPKSSIDSWDKCKDAYISKYFPPAKIISLRNDIMNFKQLDHEHVAQAW 146

Query: 182 ERFKELLRKCPLHGISDWIQMEIFYNGLDPKTRSAVDYSAGGALLDRTYDDCIVILDRM 358
           ER K ++R CP +G+S W+ ++IFY GL+  +R+ +D + GG  ++ T  +   +LD +
Sbjct: 147 ERMKLMIRNCPANGLSLWMIIQIFYAGLNFASRNILDSATGGTFMEITLGEATKLLDNI 205


Top