BLASTX nr result

ID: Atractylodes21_contig00044648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044648
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    72   1e-12
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    71   6e-12
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    71   6e-12
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    69   1e-11
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-11

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 71.6 bits (174), Expect(2) = 1e-12
 Identities = 35/67 (52%), Positives = 41/67 (61%)
 Frame = +1

Query: 1   CWLKPSLAINGFKNLTNLDLFEIRMDQDLLEDLIYSCPLLERLALKECFGLGHLKIHTPK 180
           CWLKP     GFKNL +LDL  + + QD+ E+LI SCPLLERL L    G  +L I  P 
Sbjct: 156 CWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTNLNIDAPN 215

Query: 181 LTFFFFG 201
           L FF  G
Sbjct: 216 LLFFDIG 222



 Score = 26.2 bits (56), Expect(2) = 1e-12
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 201 GVLEDVSFENTVHLSTVS 254
           G  ED+SFENT  L+ VS
Sbjct: 223 GKFEDISFENTFQLAVVS 240


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 70.9 bits (172), Expect(2) = 6e-12
 Identities = 33/67 (49%), Positives = 40/67 (59%)
 Frame = +1

Query: 1   CWLKPSLAINGFKNLTNLDLFEIRMDQDLLEDLIYSCPLLERLALKECFGLGHLKIHTPK 180
           CWL P     GF+NL +LDL  + + QD  E+LI +CPLLERL L    G  +L IH P 
Sbjct: 388 CWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNIHAPN 447

Query: 181 LTFFFFG 201
           L FF  G
Sbjct: 448 LQFFDIG 454



 Score = 24.3 bits (51), Expect(2) = 6e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 201 GVLEDVSFENTVHLSTVS 254
           G  ED+SF+NT  L+ VS
Sbjct: 455 GKFEDISFKNTSQLAVVS 472


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 70.9 bits (172), Expect(2) = 6e-12
 Identities = 33/67 (49%), Positives = 40/67 (59%)
 Frame = +1

Query: 1   CWLKPSLAINGFKNLTNLDLFEIRMDQDLLEDLIYSCPLLERLALKECFGLGHLKIHTPK 180
           CWL P     GF+NL +LDL  + + QD  E+LI +CPLLERL L    G  +L IH P 
Sbjct: 156 CWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNIHAPN 215

Query: 181 LTFFFFG 201
           L FF  G
Sbjct: 216 LQFFDIG 222



 Score = 24.3 bits (51), Expect(2) = 6e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 201 GVLEDVSFENTVHLSTVS 254
           G  ED+SF+NT  L+ VS
Sbjct: 223 GKFEDISFKNTSQLAVVS 240


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 68.6 bits (166), Expect(2) = 1e-11
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +1

Query: 1   CWLKPSLAINGFKNLTNLDLFEIRMDQDLLEDLIYSCPLLERLALKECFGLGHLKIHTPK 180
           C L+P L   GF++L +LDL  I + Q++ E+LI+SCPLLERL L    G  HL I+ P 
Sbjct: 155 CLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHLNINAPN 214

Query: 181 LTFFFFG 201
           L FF  G
Sbjct: 215 LQFFDIG 221



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 201 GVLEDVSFENTVHLSTVS 254
           GV +DV+FENT  L+ VS
Sbjct: 222 GVYDDVTFENTFQLTLVS 239


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 67.4 bits (163), Expect(2) = 2e-11
 Identities = 34/67 (50%), Positives = 41/67 (61%)
 Frame = +1

Query: 1   CWLKPSLAINGFKNLTNLDLFEIRMDQDLLEDLIYSCPLLERLALKECFGLGHLKIHTPK 180
           C LKP LA  GF+NL NLDL  + + Q++ E LI SC +LERL L    G  HL I+ P 
Sbjct: 234 CLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGFTHLNINAPN 293

Query: 181 LTFFFFG 201
           L FF  G
Sbjct: 294 LQFFDVG 300



 Score = 26.2 bits (56), Expect(2) = 2e-11
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 201 GVLEDVSFENTVHLSTVS 254
           GV +DVSFENT  L+ VS
Sbjct: 301 GVFDDVSFENTFVLALVS 318


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