BLASTX nr result

ID: Atractylodes21_contig00044636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044636
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...    80   1e-13
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478...    79   4e-13
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]                79   4e-13
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]                79   4e-13
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]                79   4e-13

>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
            gi|258547408|gb|ACV74337.1| putative polyprotein
            [Pelargonium vein banding virus]
          Length = 1970

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 227  LPWTAFLVPGGLYEWLVMPFGLKNAPAIFQRKMDKCFK 340
            +PWTAF VPGGLYEWLVMPFGLKNAP++FQRKMD CFK
Sbjct: 1502 IPWTAFCVPGGLYEWLVMPFGLKNAPSVFQRKMDDCFK 1539


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
            polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 227  LPWTAFLVPGGLYEWLVMPFGLKNAPAIFQRKMDKCFK 340
            +PWTAF VP GLYEWLVMPFGLKNAPA+FQRKMD+CFK
Sbjct: 1397 IPWTAFWVPQGLYEWLVMPFGLKNAPAVFQRKMDQCFK 1434


>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
          Length = 1847

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 227  LPWTAFLVPGGLYEWLVMPFGLKNAPAIFQRKMDKCFK 340
            +PWTAF VP GLYEWLVMPFGLKNAPA+FQRKMD+CFK
Sbjct: 1404 IPWTAFWVPQGLYEWLVMPFGLKNAPAVFQRKMDQCFK 1441


>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
          Length = 1770

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 227  LPWTAFLVPGGLYEWLVMPFGLKNAPAIFQRKMDKCFK 340
            +PWTAF VP GLYEWLVMPFGLKNAPA+FQRKMD+CFK
Sbjct: 1327 IPWTAFWVPQGLYEWLVMPFGLKNAPAVFQRKMDQCFK 1364


>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
          Length = 1816

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 227  LPWTAFLVPGGLYEWLVMPFGLKNAPAIFQRKMDKCFK 340
            +PWTAF VP GLYEWLVMPFGLKNAPA+FQRKMD+CFK
Sbjct: 1403 IPWTAFWVPQGLYEWLVMPFGLKNAPAVFQRKMDQCFK 1440


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