BLASTX nr result

ID: Atractylodes21_contig00044622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044622
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36037.3| unnamed protein product [Vitis vinifera]              164   5e-39
emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]   164   5e-39
ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34

>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  164 bits (416), Expect = 5e-39
 Identities = 91/160 (56%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
 Frame = -3

Query: 471 FCLLLRRGYATKYSGRVVTEMDNGRSFAVEVQVPNIQQLDPRGYALPRRDLVCKVVNILH 292
           F LL  R + TKYSGRVV E  + RS AV V+   I   D RGY LPRRDL+CKV  ILH
Sbjct: 37  FRLLNTRHFGTKYSGRVVRETSDRRSVAVRVEATGILPTDVRGYPLPRRDLICKVTKILH 96

Query: 291 SQSSTSSDPFMELSDYLQXXXXXXXLSEASEILKSLHSTSLALQFFRFCPSSIPKFRHDC 112
           S    SSDPF +LS+YLQ        SEASEILK L+   L+L+FFRFC S+IPKF+H+ 
Sbjct: 97  S----SSDPFPDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNS 152

Query: 111 FTYNRILLILSKSSL---PDRLDSVRRIVDEMERSHVRGN 1
           FTYNR+L+ILSK S     +RLD +R I+D+MER  VRG+
Sbjct: 153 FTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGS 192


>emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score =  164 bits (416), Expect = 5e-39
 Identities = 91/160 (56%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
 Frame = -3

Query: 471 FCLLLRRGYATKYSGRVVTEMDNGRSFAVEVQVPNIQQLDPRGYALPRRDLVCKVVNILH 292
           F LL  R + TKYSGRVV E  + RS AV V+   I   D RGY LPRRDL+CKV  ILH
Sbjct: 37  FRLLNTRHFGTKYSGRVVRETSDRRSVAVRVEATGILPTDVRGYPLPRRDLICKVTKILH 96

Query: 291 SQSSTSSDPFMELSDYLQXXXXXXXLSEASEILKSLHSTSLALQFFRFCPSSIPKFRHDC 112
           S    SSDPF +LS+YLQ        SEASEILK L+   L+L+FFRFC S+IPKF+H+ 
Sbjct: 97  S----SSDPFPDLSEYLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNS 152

Query: 111 FTYNRILLILSKSSL---PDRLDSVRRIVDEMERSHVRGN 1
           FTYNR+L+ILSK S     +RLD +R I+D+MER  VRG+
Sbjct: 153 FTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGS 192


>ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/158 (53%), Positives = 104/158 (65%), Gaps = 3/158 (1%)
 Frame = -3

Query: 465 LLLRRGYATKYSGRVVTEMDNGRSFAVEVQVPNIQQLDPRGYALPRRDLVCKVVNIL--- 295
           L LRR +ATKY+ ++ +    GRS A EV VP     DPRGY LPRRDL+CK   IL   
Sbjct: 7   LHLRRHFATKYTAKITSTTATGRSLAAEVTVPPPLPSDPRGYLLPRRDLICKATQILLSP 66

Query: 294 HSQSSTSSDPFMELSDYLQXXXXXXXLSEASEILKSLHSTSLALQFFRFCPSSIPKFRHD 115
            S S+T SDPF +LSDYL          EASEILK+L   SLAL+FF+FCPS  P FRH+
Sbjct: 67  PSPSTTLSDPFSDLSDYLSSLSLSLTPLEASEILKALKHPSLALRFFQFCPSLNPSFRHE 126

Query: 114 CFTYNRILLILSKSSLPDRLDSVRRIVDEMERSHVRGN 1
            FTYNR+ LILSKS+ P R D  R ++ +M+R  VRG+
Sbjct: 127 SFTYNRLFLILSKSTNPARFDQARSLLHDMDRRAVRGS 164


>ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  150 bits (380), Expect = 8e-35
 Identities = 80/155 (51%), Positives = 100/155 (64%), Gaps = 5/155 (3%)
 Frame = -3

Query: 453 RGYATKYSGRVVTEMDNGRSFAVEVQVPNIQQLDPRGYALPRRDLVCKVVNIL-----HS 289
           R +ATKY+ ++ +    GRS AV V  P    +D RGYALPRRDL+C+V++IL     HS
Sbjct: 46  RHFATKYTAKITSSSPTGRSVAVVVTPPATLPVDSRGYALPRRDLICRVIDILLHRNPHS 105

Query: 288 QSSTSSDPFMELSDYLQXXXXXXXLSEASEILKSLHSTSLALQFFRFCPSSIPKFRHDCF 109
              T  D F +LS Y Q        +EASEILKSL+S  LALQFF  C S  PKFRHD F
Sbjct: 106 SLITIDDRFSDLSSYFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAF 165

Query: 108 TYNRILLILSKSSLPDRLDSVRRIVDEMERSHVRG 4
           TY+RILL+LS SS   R+D VR I+ +M+R  +RG
Sbjct: 166 TYSRILLMLSHSSSSKRIDQVREILSQMDRDQIRG 200


>ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/155 (50%), Positives = 100/155 (64%), Gaps = 5/155 (3%)
 Frame = -3

Query: 453 RGYATKYSGRVVTEMDNGRSFAVEVQVPNIQQLDPRGYALPRRDLVCKVVNIL-----HS 289
           R +ATKY+ ++ +    GRS AV V  P    +D RGYALPRRDL+C+V+++L     HS
Sbjct: 51  RHFATKYTAKITSSSPTGRSVAVVVTPPATLPVDSRGYALPRRDLICRVIDMLLHRNPHS 110

Query: 288 QSSTSSDPFMELSDYLQXXXXXXXLSEASEILKSLHSTSLALQFFRFCPSSIPKFRHDCF 109
              T  D F +LS Y Q        +EASEILKSL+S  LALQFF  C S  PKFRHD F
Sbjct: 111 SLITIDDRFSDLSSYFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAF 170

Query: 108 TYNRILLILSKSSLPDRLDSVRRIVDEMERSHVRG 4
           TY+RILL+LS SS   R+D VR I+ +M+R  +RG
Sbjct: 171 TYSRILLMLSHSSSSKRIDQVREILSQMDRDQIRG 205


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