BLASTX nr result

ID: Atractylodes21_contig00044601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044601
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   199   2e-49
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   183   1e-44
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   173   1e-41

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  199 bits (507), Expect = 2e-49
 Identities = 98/148 (66%), Positives = 122/148 (82%)
 Frame = -1

Query: 445 NKELAVHYVPDVFRYNTLIFRLLRENRLEEVCNLVIEMRENNVPPDELTMDIVLCFFCKA 266
           +K+ +  YVP+V  YN LI RLLRENRLEEV +L++EMRE  + PD++TM+ VLCFFCKA
Sbjct: 342 SKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKA 401

Query: 265 GMVDVALQLYDSRGELGLSLSSMAFNYLMNTLCGDGSVVDAYRILKNSIEQGYFPGKTAF 86
           GMVDVAL+LY+SR E GLS +SMA+NYL+NTLCGDGS  +AY +LK+S+EQGYFPGK  F
Sbjct: 402 GMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTF 461

Query: 85  SILAGALCKLEKLDMMNELFLVALEKNV 2
           SILA ALC+  KLD M EL LVAL++N+
Sbjct: 462 SILADALCQEGKLDKMKELVLVALDRNI 489


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  199 bits (507), Expect = 2e-49
 Identities = 98/148 (66%), Positives = 122/148 (82%)
 Frame = -1

Query: 445 NKELAVHYVPDVFRYNTLIFRLLRENRLEEVCNLVIEMRENNVPPDELTMDIVLCFFCKA 266
           +K+ +  YVP+V  YN LI RLLRENRLEEV +L++EMRE  + PD++TM+ VLCFFCKA
Sbjct: 342 SKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKA 401

Query: 265 GMVDVALQLYDSRGELGLSLSSMAFNYLMNTLCGDGSVVDAYRILKNSIEQGYFPGKTAF 86
           GMVDVAL+LY+SR E GLS +SMA+NYL+NTLCGDGS  +AY +LK+S+EQGYFPGK  F
Sbjct: 402 GMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTF 461

Query: 85  SILAGALCKLEKLDMMNELFLVALEKNV 2
           SILA ALC+  KLD M EL LVAL++N+
Sbjct: 462 SILADALCQEGKLDKMKELVLVALDRNI 489


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Cucumis sativus]
          Length = 913

 Score =  184 bits (466), Expect = 9e-45
 Identities = 89/147 (60%), Positives = 114/147 (77%)
 Frame = -1

Query: 445 NKELAVHYVPDVFRYNTLIFRLLRENRLEEVCNLVIEMRENNVPPDELTMDIVLCFFCKA 266
           + +L   Y+PDVFRYN LI RLLRENRL+EV +L+ EM + ++ PD++TMD  +CF CKA
Sbjct: 366 SSKLDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKA 425

Query: 265 GMVDVALQLYDSRGELGLSLSSMAFNYLMNTLCGDGSVVDAYRILKNSIEQGYFPGKTAF 86
           GMV+VAL+LY+S  E G+S ++MA+NYL+N LC DGS  +AYRILK SI +GYFPGK  F
Sbjct: 426 GMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKTF 485

Query: 85  SILAGALCKLEKLDMMNELFLVALEKN 5
           SILA ALC+  KLD M EL + ALE+N
Sbjct: 486 SILASALCREGKLDKMKELVIFALERN 512


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/147 (60%), Positives = 114/147 (77%)
 Frame = -1

Query: 445 NKELAVHYVPDVFRYNTLIFRLLRENRLEEVCNLVIEMRENNVPPDELTMDIVLCFFCKA 266
           + +L   Y+PDVFRYN LI RLLRENRL+EV +L+ EM + ++ PD++TMD  +CF CKA
Sbjct: 342 SSKLDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKA 401

Query: 265 GMVDVALQLYDSRGELGLSLSSMAFNYLMNTLCGDGSVVDAYRILKNSIEQGYFPGKTAF 86
           GMV+VAL+LY+S  E G+S ++MA+NYL+N LC DGS  +AYRILK SI +GYFPGK  F
Sbjct: 402 GMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKXF 461

Query: 85  SILAGALCKLEKLDMMNELFLVALEKN 5
           SILA ALC+  KLD M EL + ALE+N
Sbjct: 462 SILASALCREGKLDKMKELVIFALERN 488


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/146 (57%), Positives = 110/146 (75%)
 Frame = -1

Query: 442 KELAVHYVPDVFRYNTLIFRLLRENRLEEVCNLVIEMRENNVPPDELTMDIVLCFFCKAG 263
           K+    YVP++F YN L+ RLL+ENRL E C+L++EM E+   PD++TM+  L FFCKAG
Sbjct: 357 KKTLESYVPEIFHYNALLCRLLKENRLTEACDLLMEMMEDGFSPDKVTMNAALSFFCKAG 416

Query: 262 MVDVALQLYDSRGELGLSLSSMAFNYLMNTLCGDGSVVDAYRILKNSIEQGYFPGKTAFS 83
           MVDVAL LY+ + E GLS S+M  NYL+N+LC +G+V DAY +LK+S E GYFPGK AFS
Sbjct: 417 MVDVALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKSSSEHGYFPGKRAFS 476

Query: 82  ILAGALCKLEKLDMMNELFLVALEKN 5
           +L  AL +  K++MMNELF  ALE+N
Sbjct: 477 MLTDALHREGKVEMMNELFFWALERN 502


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