BLASTX nr result

ID: Atractylodes21_contig00044583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044583
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]   179   2e-43
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,...   161   5e-38
ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36

>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score =  179 bits (454), Expect = 2e-43
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = -2

Query: 342 STSFVENVLGHLFATHSNGLKAFEFFKFSLQCSGICPSADAFEKTLHILTRMRYFSKAWE 163
           S +FVENVLG LFA HSNG KAFEFFKFSLQ S  CPS+DAFEKTLHILTRMRYF KAWE
Sbjct: 74  SNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWE 133

Query: 162 LIEEIQKTHPSLLTLKSMSIMLSRIAKFQSFEETLEAFEKLECKLSDGKQFGTD 1
           L+EEIQ+THPSLLTLKSMSIMLSRIAKFQS+E+TLEAF ++E  +  G++FG +
Sbjct: 134 LMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGAN 187


>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
          Length = 515

 Score =  179 bits (454), Expect = 2e-43
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = -2

Query: 342 STSFVENVLGHLFATHSNGLKAFEFFKFSLQCSGICPSADAFEKTLHILTRMRYFSKAWE 163
           S +FVENVLG LFA HSNG KAFEFFKFSLQ S  CPS+DAFEKTLHILTRMRYF KAWE
Sbjct: 74  SNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWE 133

Query: 162 LIEEIQKTHPSLLTLKSMSIMLSRIAKFQSFEETLEAFEKLECKLSDGKQFGTD 1
           L+EEIQ+THPSLLTLKSMSIMLSRIAKFQS+E+TLEAF ++E  +  G++FG +
Sbjct: 134 LMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGAN 187


>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  161 bits (408), Expect = 5e-38
 Identities = 82/116 (70%), Positives = 95/116 (81%)
 Frame = -2

Query: 348 AFSTSFVENVLGHLFATHSNGLKAFEFFKFSLQCSGICPSADAFEKTLHILTRMRYFSKA 169
           A ST FVENVLG LFA HSNGLKA EFF+FSL+ S   PS+ AFE TLHIL RMRYF KA
Sbjct: 89  ALSTDFVENVLGRLFAAHSNGLKALEFFRFSLRHSHFNPSSFAFEMTLHILARMRYFEKA 148

Query: 168 WELIEEIQKTHPSLLTLKSMSIMLSRIAKFQSFEETLEAFEKLECKLSDGKQFGTD 1
           WEL+ EI K+HPSLLTLKSM IMLS+IAKFQS+E+TLEAF+++E  +  GK FGT+
Sbjct: 149 WELMMEIGKSHPSLLTLKSMGIMLSKIAKFQSYEDTLEAFKRMEKTVFVGKTFGTE 204


>ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|222834094|gb|EEE72571.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/115 (67%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 STSFVENVLGHLFATHSNGLKAFEFFKFSLQC-SGICPSADAFEKTLHILTRMRYFSKAW 166
           +T+FVENVLG LFA HSNGLKA EFFK+SL   +   PS D+FEKTLHIL RMRYF KAW
Sbjct: 71  TTAFVENVLGRLFAAHSNGLKALEFFKYSLNNQTHFSPSPDSFEKTLHILARMRYFDKAW 130

Query: 165 ELIEEIQKTHPSLLTLKSMSIMLSRIAKFQSFEETLEAFEKLECKLSDGKQFGTD 1
           +L+ EI KTHP LLTLKSMSIML +IAKF+S+EETL+AFEK+E ++  G++FG +
Sbjct: 131 DLMVEIGKTHPFLLTLKSMSIMLCKIAKFRSYEETLDAFEKMEKRVFVGRKFGVE 185


>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
           gi|449520004|ref|XP_004167024.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
          Length = 504

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/114 (65%), Positives = 96/114 (84%)
 Frame = -2

Query: 342 STSFVENVLGHLFATHSNGLKAFEFFKFSLQCSGICPSADAFEKTLHILTRMRYFSKAWE 163
           S +F+ +VLG LFA HSNGLKA EFFKF L  S   P++DAFEKTLHIL+RMRYF ++WE
Sbjct: 72  SNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWE 131

Query: 162 LIEEIQKTHPSLLTLKSMSIMLSRIAKFQSFEETLEAFEKLECKLSDGKQFGTD 1
           L+ EI++THP LLTLKSMSI+LSRIAKF SFEET+EAF+++E ++  G++FGT+
Sbjct: 132 LMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185


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