BLASTX nr result

ID: Atractylodes21_contig00044568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044568
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   177   8e-43
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   174   7e-42
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   174   9e-42
ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   172   3e-41
ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding...   160   1e-37

>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score =  177 bits (449), Expect = 8e-43
 Identities = 81/122 (66%), Positives = 99/122 (81%)
 Frame = -1

Query: 366 LDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEG 187
           LDEASYLSWVEK KETS++ +N  M+  N+R+LP+ K+L  E+ +KKAEEKKL++WEA G
Sbjct: 618 LDEASYLSWVEKFKETSQSNENLVMDLGNRRNLPDNKYLNLEAAKKKAEEKKLSKWEALG 677

Query: 186 YESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGI 7
           Y SLSV D + P DG+ LSDSG V+FV GDCT P K+C SEPS+IFSCVD SGNWGHGG+
Sbjct: 678 YHSLSVGDPIYPVDGDALSDSGFVHFVVGDCTHPDKLCSSEPSVIFSCVDESGNWGHGGM 737

Query: 6   FD 1
           FD
Sbjct: 738 FD 739


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/122 (67%), Positives = 99/122 (81%)
 Frame = -1

Query: 366 LDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEG 187
           LDEASYL WVEK KE S++ D+  ++  N+R LPEEK LK E+ RKKAEE+KLA+WEA G
Sbjct: 624 LDEASYLVWVEKFKEASQSSDDPIIQVGNRRKLPEEKLLKLEAARKKAEEEKLAKWEAHG 683

Query: 186 YESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGI 7
           Y SLSVKD     D +++SDSGSV+FVYGDCT PSKVCPSE +IIFSC+D+SG WGHGG+
Sbjct: 684 YNSLSVKDPPSHVDVDMISDSGSVDFVYGDCTLPSKVCPSEATIIFSCIDDSGIWGHGGM 743

Query: 6   FD 1
           FD
Sbjct: 744 FD 745


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/122 (64%), Positives = 102/122 (83%)
 Frame = -1

Query: 366 LDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEG 187
           LDEASYLSWVE+ KE S++  N  ++  ++RSLPE+KHLK E+ +KKAEEKKL +WE+ G
Sbjct: 613 LDEASYLSWVERFKEASQSSGNMVLDLGHRRSLPEDKHLKLEAAKKKAEEKKLNKWESLG 672

Query: 186 YESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGI 7
           Y SLSVKD     DG++LS+SG ++FV GDCT+P+KVCPSEP++IFSCVDNSGNWGHGG+
Sbjct: 673 YHSLSVKDPEA-VDGDVLSESGFLHFVVGDCTEPAKVCPSEPTVIFSCVDNSGNWGHGGM 731

Query: 6   FD 1
           F+
Sbjct: 732 FN 733


>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/122 (66%), Positives = 99/122 (81%)
 Frame = -1

Query: 366  LDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEG 187
            LDEASYLSWV+K +E S++  +S  + R++R++ EEK LK ES RKKAEEKKLARWEA G
Sbjct: 1228 LDEASYLSWVKKFEEVSKSSCDSITDLRSRRNVDEEKSLKIESARKKAEEKKLARWEALG 1287

Query: 186  YESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGI 7
            Y+SL+VKD + P   +I S SGSV+FVYGDCT PS VC SEP+IIFSCVD SG+WGHGG+
Sbjct: 1288 YQSLNVKDAISPTGNDIASASGSVHFVYGDCTAPSNVCSSEPAIIFSCVDTSGHWGHGGM 1347

Query: 6    FD 1
            FD
Sbjct: 1348 FD 1349


>ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Brachypodium distachyon]
          Length = 893

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/122 (62%), Positives = 95/122 (77%)
 Frame = -1

Query: 366 LDEASYLSWVEKLKETSETCDNSAMEERNKRSLPEEKHLKTESVRKKAEEKKLARWEAEG 187
           ++EA+YLSWV K KE S + +N  +E+  +RS PEEK LK E+ +KKAEEK+LA+W+  G
Sbjct: 633 INEAAYLSWVGKFKEASHSIENVTVEQERQRSAPEEKVLKREANKKKAEEKRLAKWKTSG 692

Query: 186 YESLSVKDVVCPADGNILSDSGSVNFVYGDCTQPSKVCPSEPSIIFSCVDNSGNWGHGGI 7
           YE+L+VKD     + NI SDSGSV  VYGDCT PSKVCP +P+IIFSCVDNSG WGHGG+
Sbjct: 693 YETLTVKDPDDIPNQNI-SDSGSVQLVYGDCTNPSKVCPGKPAIIFSCVDNSGTWGHGGM 751

Query: 6   FD 1
           FD
Sbjct: 752 FD 753


Top