BLASTX nr result

ID: Atractylodes21_contig00044559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044559
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001769221.1| predicted protein [Physcomitrella patens sub...    75   5e-12
gb|AAW79307.1| chloroplast cytochrome b6 [Acetabularia acetabulum]     74   1e-11
sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex ir...    73   3e-11
ref|XP_002513246.1| Cytochrome b6-f complex iron-sulfur subunit,...    73   3e-11
gb|ABD73295.1| photosynthetic electron transfer-like protein [Pa...    73   3e-11

>ref|XP_001769221.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679486|gb|EDQ65933.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 212

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   QGKVVRGPAPLSLALAHVDIEDERVVFDPWTETDFRTGD 118
           QGKVVRGPAPLSLALAHVD+ D++VVF PWTETDFRTG+
Sbjct: 169 QGKVVRGPAPLSLALAHVDVVDDKVVFSPWTETDFRTGE 207


>gb|AAW79307.1| chloroplast cytochrome b6 [Acetabularia acetabulum]
          Length = 174

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   QGKVVRGPAPLSLALAHVDIEDERVVFDPWTETDFRTGD 118
           QGKVVRGPAPLSLALAH DI+D+ VVF PWTETDFRTG+
Sbjct: 131 QGKVVRGPAPLSLALAHCDIQDDAVVFSPWTETDFRTGE 169


>sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|37222949|gb|AAQ90151.1| putative Rieske Fe-S protein
           precursor [Solanum tuberosum]
          Length = 230

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   QGKVVRGPAPLSLALAHVDIEDERVVFDPWTETDFRTGDA 121
           QGKVVRGPAPLSLALAH DI+D +VVF PW ETDFRTGD+
Sbjct: 187 QGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDS 226


>ref|XP_002513246.1| Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor,
           putative [Ricinus communis] gi|223547620|gb|EEF49114.1|
           Cytochrome b6-f complex iron-sulfur subunit, chloroplast
           precursor, putative [Ricinus communis]
          Length = 220

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   QGKVVRGPAPLSLALAHVDIEDERVVFDPWTETDFRTGDA 121
           QG+VVRGPAPLSLALAH DI+D +VVF PW ETDFRTGDA
Sbjct: 177 QGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDA 216


>gb|ABD73295.1| photosynthetic electron transfer-like protein [Panax ginseng]
          Length = 184

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   QGKVVRGPAPLSLALAHVDIEDERVVFDPWTETDFRTGD 118
           QGKVVRGPAPLSLALAH DI+D +VVF PWTETDFRTG+
Sbjct: 141 QGKVVRGPAPLSLALAHADIDDGKVVFVPWTETDFRTGE 179


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