BLASTX nr result

ID: Atractylodes21_contig00044553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044553
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   117   1e-24
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   107   1e-21
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   105   4e-21
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   105   4e-21
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   105   4e-21

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/93 (60%), Positives = 67/93 (72%)
 Frame = -1

Query: 280  GELKTYQRIALEWFWL*MRRTVKAYLXXXXXXXXXXXXXTHPSGLLQPLPIPSQVWDEIT 101
            GELKTY R+A EW+W  MR+ V  Y+              HP GLLQPLPIPS VW++I+
Sbjct: 1187 GELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDIS 1246

Query: 100  MDFIEGLPCSQGFDTILVVVDRLTKFAHFLGLR 2
            MDFIEGLP S+G DTILV+VDRL+K+AHFL LR
Sbjct: 1247 MDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLR 1279


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = -1

Query: 280  GELKTYQRIALEWFWL*MRRTVKAYLXXXXXXXXXXXXXTHPSGLLQPLPIPSQVWDEIT 101
            G  KTYQR+A EWFW  M++ V  ++               P+GLLQPLPIP+ +W++++
Sbjct: 956  GIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVS 1015

Query: 100  MDFIEGLPCSQGFDTILVVVDRLTKFAHFLGLR 2
            MDF+EGLP S G+D+ILVVVDRL+K+ HF+GLR
Sbjct: 1016 MDFVEGLPKSGGWDSILVVVDRLSKYGHFIGLR 1048


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/93 (51%), Positives = 68/93 (73%)
 Frame = -1

Query: 280  GELKTYQRIALEWFWL*MRRTVKAYLXXXXXXXXXXXXXTHPSGLLQPLPIPSQVWDEIT 101
            G+L+TY+RIA E +W  M+  +K Y+               P+GLLQPLPIPS++W++I+
Sbjct: 880  GQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDIS 939

Query: 100  MDFIEGLPCSQGFDTILVVVDRLTKFAHFLGLR 2
            MDFIEGLP S+ FD++LVVVD+L+K+AHF+ LR
Sbjct: 940  MDFIEGLPRSRTFDSVLVVVDQLSKYAHFVALR 972


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = -1

Query: 280  GELKTYQRIALEWFWL*MRRTVKAYLXXXXXXXXXXXXXTHPSGLLQPLPIPSQVWDEIT 101
            G  KTY+R+A EW+W  M++ V  ++               P+GLLQPLPIP  +W++I+
Sbjct: 1120 GIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDIS 1179

Query: 100  MDFIEGLPCSQGFDTILVVVDRLTKFAHFLGLR 2
            MDF+EGLP SQG+DTILVVVDRL+K+AHF+ L+
Sbjct: 1180 MDFVEGLPKSQGWDTILVVVDRLSKYAHFITLK 1212


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/92 (58%), Positives = 64/92 (69%)
 Frame = -1

Query: 280 GELKTYQRIALEWFWL*MRRTVKAYLXXXXXXXXXXXXXTHPSGLLQPLPIPSQVWDEIT 101
           G L+TY+RIA +++W  M R V  Y+               P+GLLQPLPIP QVWD+IT
Sbjct: 215 GVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQPLPIPCQVWDDIT 274

Query: 100 MDFIEGLPCSQGFDTILVVVDRLTKFAHFLGL 5
           MDFIEGLP SQG +TILVVVDRL+K AHFL L
Sbjct: 275 MDFIEGLPPSQGKNTILVVVDRLSKSAHFLAL 306


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