BLASTX nr result

ID: Atractylodes21_contig00044541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044541
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat...    59   4e-07
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat...    58   7e-07
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...    56   3e-06
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S...    56   3e-06
ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea ma...    56   3e-06

>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = -2

Query: 455 KVHGQSAIEVKSEVHSFTANDKIHPQGEPIRGLLRSLEVRMREDGY 318
           K+ GQS +E+K+EVHSF A+D+ H + + I G+LR L+ RM+E+GY
Sbjct: 646 KIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDARMKEEGY 691


>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -2

Query: 461 LLKVHGQSAIEVKSEVHSFTANDKIHPQGEPIRGLLRSLEVRMREDGYVLDV 306
           L K+ GQS +E+K+EVHSF A+D+ H + + I  +LR L+ RMRE+GY  D+
Sbjct: 643 LKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDARMREEGYDPDL 694


>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/72 (38%), Positives = 45/72 (62%)
 Frame = -2

Query: 461 LLKVHGQSAIEVKSEVHSFTANDKIHPQGEPIRGLLRSLEVRMREDGYVLDVGSPVDDSF 282
           L K+ GQS +EV+  VHSF A+D+ HP  + I  LLR LE +M ++ Y+ D+   + D+ 
Sbjct: 643 LKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDTG 702

Query: 281 QAI*FPKRVQPT 246
             + F +R++ T
Sbjct: 703 AVLQFWQRIKAT 714


>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
           gi|241922063|gb|EER95207.1| hypothetical protein
           SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = -2

Query: 461 LLKVHGQSAIEVKSEVHSFTANDKIHPQGEPIRGLLRSLEVRMREDGYVLDVGSPVDD 288
           + K+   S IEV + +H F   DK+HPQ E +  LL+ L V+MRE+GYV D G  + D
Sbjct: 497 ITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHD 554


>ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
           gi|194705708|gb|ACF86938.1| unknown [Zea mays]
           gi|413956425|gb|AFW89074.1| hypothetical protein
           ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = -2

Query: 461 LLKVHGQSAIEVKSEVHSFTANDKIHPQGEPIRGLLRSLEVRMREDGYVLDVGSPVDD 288
           + K+   S IEV + VH F   DK HPQ E I  LL+ L V+MRE+GYV D G  + D
Sbjct: 497 ITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHD 554


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