BLASTX nr result

ID: Atractylodes21_contig00044525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044525
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29214.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...    56   3e-06
ref|XP_002304398.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB...    55   6e-06

>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -1

Query: 352 RGSRRVSFTFRKVRKGPCHCNYPQFCDSRR 263
           RG RRVSFTFRKVR GPC C +PQ+CDS R
Sbjct: 883 RGPRRVSFTFRKVRTGPCQCEFPQYCDSPR 912


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -1

Query: 352 RGSRRVSFTFRKVRKGPCHCNYPQFCDSRR 263
           RG RRVSFTFRKVR GPC C +PQ+CDS R
Sbjct: 320 RGPRRVSFTFRKVRTGPCQCEFPQYCDSPR 349


>ref|XP_002304398.1| predicted protein [Populus trichocarpa] gi|222841830|gb|EEE79377.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = -1

Query: 352 RGSRRVSFTFRKVRKGPCHCNYPQFCDSRR 263
           RG+RRVSFTFRKV +GPC C +PQ+CDS R
Sbjct: 315 RGARRVSFTFRKVLRGPCQCEFPQYCDSER 344


>ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Glycine max]
          Length = 342

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -1

Query: 352 RGSRRVSFTFRKVRKGPCHCNYPQFCDSRR 263
           R SRRVSFTFRKVR+G C C +PQ+CDSRR
Sbjct: 313 RASRRVSFTFRKVREGLCKCEFPQYCDSRR 342


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