BLASTX nr result

ID: Atractylodes21_contig00044412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044412
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524506.1| grr1, plant, putative [Ricinus communis] gi|...    66   3e-09
ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycope...    59   4e-07
ref|XP_002285126.1| PREDICTED: EIN3-binding F-box protein 1-like...    56   3e-06
emb|CAN82790.1| hypothetical protein VITISV_030601 [Vitis vinifera]    56   3e-06
ref|NP_001234864.1| EIN3-binding F-box protein 2 [Solanum lycope...    55   4e-06

>ref|XP_002524506.1| grr1, plant, putative [Ricinus communis]
           gi|223536294|gb|EEF37946.1| grr1, plant, putative
           [Ricinus communis]
          Length = 648

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
 Frame = -2

Query: 253 GSLCSK--DSSGLLSVASHQDVYSQPPCKQL*ISNSFFLF---FKKENKPSFEVLPK--- 98
           GSLC+   D     S+ SH D YS PPCK+  IS+ F      F++  +PS +VLP    
Sbjct: 17  GSLCANPMDLGRYYSIGSHVDAYS-PPCKRARISSPFLFGSSEFEQNKQPSIDVLPDECL 75

Query: 97  ---------GQASSASACISKRWFTILSNVRNLEIASDKVL 2
                    G+  SA AC+SKRW T+LS++R  E+ +++++
Sbjct: 76  FEIFRRIPGGKERSACACVSKRWLTLLSSIRRAELCNERIV 116


>ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|82734614|gb|ABB89717.1| EIN3-binding F-box protein 1
           [Solanum lycopersicum] gi|83584402|gb|ABC24971.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|240017777|gb|ACS44350.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum]
          Length = 637

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
 Frame = -2

Query: 253 GSLCSKDSSGLLSVASHQDVYSQPPCKQL*ISNSFFLFFKKENKPSFEVLPK-------- 98
           GS CS D   +LS+  H DVY  PP K+  IS  F +  + ++ PS EVLP         
Sbjct: 17  GSFCSADLGLMLSLG-HADVYC-PPRKRARISGPFVVEDRSKD-PSLEVLPDECLFEILR 73

Query: 97  ----GQASSASACISKRWFTILSNVRNLEIASDK 8
               G+   A+AC+SKRW T+LS+V+N EI   K
Sbjct: 74  RLPGGRERGAAACVSKRWLTVLSSVKNSEICRSK 107


>ref|XP_002285126.1| PREDICTED: EIN3-binding F-box protein 1-like [Vitis vinifera]
          Length = 667

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 17/99 (17%)
 Frame = -2

Query: 253 GSLCS--KDSSGLLSVASHQDVYSQPPCKQL*ISNSFFLF---FKKENKPSFEVLP---- 101
           GS+ S  KDSS  LS+  H DVY  PP K+  IS  F +    F+++ + S +VLP    
Sbjct: 17  GSIYSNIKDSSLFLSLGRHVDVYF-PPRKRSRISAPFVVSGDKFEQKEQVSIDVLPDECL 75

Query: 100 --------KGQASSASACISKRWFTILSNVRNLEIASDK 8
                   +GQ  SA AC+SKRW  +LS+++  EI S+K
Sbjct: 76  FEILRRLPEGQEKSACACVSKRWLMLLSSIQRDEICSNK 114


>emb|CAN82790.1| hypothetical protein VITISV_030601 [Vitis vinifera]
          Length = 718

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 17/99 (17%)
 Frame = -2

Query: 253 GSLCS--KDSSGLLSVASHQDVYSQPPCKQL*ISNSFFLF---FKKENKPSFEVLP---- 101
           GS+ S  KDSS  LS+  H DVY  PP K+  IS  F +    F+++ + S +VLP    
Sbjct: 117 GSIYSNIKDSSLFLSLGRHVDVYF-PPRKRSRISAPFVVSGDKFEQKEQVSIDVLPDECL 175

Query: 100 --------KGQASSASACISKRWFTILSNVRNLEIASDK 8
                   +GQ  SA AC+SKRW  +LS+++  EI S+K
Sbjct: 176 FEILRRLPEGQEKSACACVSKRWLMLLSSIQRDEICSNK 214


>ref|NP_001234864.1| EIN3-binding F-box protein 2 [Solanum lycopersicum]
           gi|83584404|gb|ABC24972.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum] gi|240017775|gb|ACS44349.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
          Length = 665

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
 Frame = -2

Query: 238 KDSSGLLSVASHQDVYSQPPCKQL*ISNSFFLFFKKENKPSFEVLPK------------G 95
           K+SS  LS+ +H DVY  PPCK+  ++  F    KK    S +VLP             G
Sbjct: 20  KESSLFLSLRNHVDVYF-PPCKRSRVAVPFVFSEKKHKLSSIDVLPDECLFEVLRRLSDG 78

Query: 94  QASSASACISKRWFTILSNVRNLE 23
           +  SASAC+SKRW  +LS++R  E
Sbjct: 79  KDRSASACVSKRWLMLLSSIRGDE 102


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