BLASTX nr result

ID: Atractylodes21_contig00044374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044374
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594681.1| RNA binding protein [Medicago truncatula] gi...    72   6e-11
ref|NP_187304.1| agenet domain-containing protein [Arabidopsis t...    68   9e-10
ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus c...    67   2e-09
gb|AFW82724.1| hypothetical protein ZEAMMB73_548849 [Zea mays] g...    64   1e-08
gb|ACR38755.1| unknown [Zea mays] gi|413950078|gb|AFW82727.1| RN...    64   1e-08

>ref|XP_003594681.1| RNA binding protein [Medicago truncatula]
           gi|355483729|gb|AES64932.1| RNA binding protein
           [Medicago truncatula]
          Length = 471

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGRKLVKEEVDVLCIRPCPPIIQRADRF 167
           E+GY  +WYPA ++    NGKY VEY T+KTDD  + +KE VDV  IRP PP I    R+
Sbjct: 267 EQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQQLKEVVDVSDIRPRPPDIDHFCRY 326

Query: 166 QLSDRADAWDVNRW 125
              +  DAW  + W
Sbjct: 327 VRQEWVDAWYNDGW 340



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGR-KLVKEEVDVLCIRPCPPIIQRADR 170
           E GY   W+ A I+  + N K+ VE+R +  +DG  +++KEE++   IRPCPP +     
Sbjct: 79  EEGYQGAWFVATIIDTLGNEKFLVEHRDLLMNDGGIEVLKEEIETKFIRPCPPHVPMFGS 138

Query: 169 FQLSDRADAWDVNRW 125
           F+     DAW  + W
Sbjct: 139 FKRLQEVDAWYNDGW 153


>ref|NP_187304.1| agenet domain-containing protein [Arabidopsis thaliana]
           gi|12322681|gb|AAG51333.1|AC020580_13 hypothetical
           protein; 66083-64412 [Arabidopsis thaliana]
           gi|332640885|gb|AEE74406.1| agenet domain-containing
           protein [Arabidopsis thaliana]
          Length = 466

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGRKLVKEEVDVLCIR-PCPPIIQRADR 170
           E GY ++W+ A I+  +   +Y+VEY+T+KTDD R+L+KEE     IR P PP+I +  R
Sbjct: 345 EPGYEASWFSAKIVSYLGENRYTVEYQTLKTDDERELLKEEARGSDIRPPPPPLIPKGYR 404

Query: 169 FQLSDRADAWDVNRW*YSEICRTLEDSSRQGI 74
           ++L +  DAW    W    + +   + +R G+
Sbjct: 405 YELYELVDAWYNEGWWSGRVYKINNNKTRYGV 436


>ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus communis]
           gi|223548494|gb|EEF49985.1| hypothetical protein
           RCOM_1435690 [Ricinus communis]
          Length = 363

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/85 (35%), Positives = 47/85 (55%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGRKLVKEEVDVLCIRPCPPIIQRADRF 167
           E G+   W+ A I+  V   KY +EY+ ++T+D    ++EE+D+  +RPCPP I   + F
Sbjct: 231 EEGFQGAWFAATIIEAVGKDKYLIEYKNLRTEDDTDFLREEIDIAHLRPCPPEIIMVNSF 290

Query: 166 QLSDRADAWDVNRW*YSEICRTLED 92
           +L D  DA   + W    I + L D
Sbjct: 291 KLLDEVDALYNDGWWVGVISKVLAD 315


>gb|AFW82724.1| hypothetical protein ZEAMMB73_548849 [Zea mays]
           gi|413950076|gb|AFW82725.1| hypothetical protein
           ZEAMMB73_548849 [Zea mays] gi|413950077|gb|AFW82726.1|
           hypothetical protein ZEAMMB73_548849 [Zea mays]
          Length = 275

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGRKLVKEEVDVLCIRPCPPIIQRADRF 167
           + G+   W+ A ++  V   K+ VEY T+K DDG K +KE V+   IRPCPP I   D F
Sbjct: 151 DEGFRGAWFEATVVKAV-GSKFLVEYATLKADDGTKPLKESVEARHIRPCPPDIPATDGF 209

Query: 166 QLSDRADAWDVNRW*YSEICRTL 98
           +L D  DA+  + W    + + L
Sbjct: 210 KLLDEVDAFCNDAWWVGVVSKVL 232


>gb|ACR38755.1| unknown [Zea mays] gi|413950078|gb|AFW82727.1| RNA binding protein
           [Zea mays]
          Length = 443

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = -3

Query: 346 ERGYVSTWYPAVILGPVHNGKYSVEYRTVKTDDGRKLVKEEVDVLCIRPCPPIIQRADRF 167
           + G+   W+ A ++  V   K+ VEY T+K DDG K +KE V+   IRPCPP I   D F
Sbjct: 319 DEGFRGAWFEATVVKAV-GSKFLVEYATLKADDGTKPLKESVEARHIRPCPPDIPATDGF 377

Query: 166 QLSDRADAWDVNRW*YSEICRTL 98
           +L D  DA+  + W    + + L
Sbjct: 378 KLLDEVDAFCNDAWWVGVVSKVL 400


Top