BLASTX nr result

ID: Atractylodes21_contig00044352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044352
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...    80   2e-13
gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subc...    80   2e-13
gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Ja...    80   2e-13
emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]         79   5e-13
gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]      78   9e-13

>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = -2

Query: 305  IPPQLSSDLERLNIEFCLRGNSGILSNISVESTLISQIKEAQQEDDELWACFQKAEGDAT 126
            IPP+L+  +E LN+    RG    L+ +  + TL+ QI+EAQ+ D ++    +  +    
Sbjct: 1932 IPPELNQQMEALNLSIVSRG---FLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKA 1988

Query: 125  SEFRIDSDHTLWYRDRLCVPNVSELRESVLSEAHNSSFSIH 3
            + F  D   TLW R+R+CVP+V EL++ +L EAH S +SIH
Sbjct: 1989 AGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIH 2029


>gb|ABB47095.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 998

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = -2

Query: 305 IPPQLSSDLERLNIEFCLRGNSGILSNISVESTLISQIKEAQQEDDELWACFQKAEGDAT 126
           IPP+L+  +E LN+    RG    L+ +  + TL+ QI+EAQ+ D ++    +  +    
Sbjct: 483 IPPELNQQMEALNLSIVSRG---FLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKA 539

Query: 125 SEFRIDSDHTLWYRDRLCVPNVSELRESVLSEAHNSSFSIH 3
           + F  D   TLW R+R+CVP+V EL++ +L EAH S +SIH
Sbjct: 540 AGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIH 580


>gb|AAK51580.1|AC022352_16 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1023

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = -2

Query: 305 IPPQLSSDLERLNIEFCLRGNSGILSNISVESTLISQIKEAQQEDDELWACFQKAEGDAT 126
           IPP+L+  +E LN+    RG    L+ +  + TL+ QI+EAQ+ D ++    +  +    
Sbjct: 508 IPPELNQQMEALNLSIVSRG---FLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKA 564

Query: 125 SEFRIDSDHTLWYRDRLCVPNVSELRESVLSEAHNSSFSIH 3
           + F  D   TLW R+R+CVP+V EL++ +L EAH S +SIH
Sbjct: 565 AGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIH 605


>emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]
          Length = 1639

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/101 (38%), Positives = 60/101 (59%)
 Frame = -2

Query: 305  IPPQLSSDLERLNIEFCLRGNSGILSNISVESTLISQIKEAQQEDDELWACFQKAEGDAT 126
            IPP+L+  LE LN+    RG    L+ +  + TL+ QI+EAQ+ D ++    +  +    
Sbjct: 1183 IPPELNQQLEALNLSIVGRG---FLATLEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKA 1239

Query: 125  SEFRIDSDHTLWYRDRLCVPNVSELRESVLSEAHNSSFSIH 3
            + F  D   TLW  +R+CVP+V EL++ +L EAH S +SIH
Sbjct: 1240 AGFTEDEHGTLWNGNRVCVPDVRELKQLILQEAHESPYSIH 1280


>gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1474

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/101 (37%), Positives = 60/101 (59%)
 Frame = -2

Query: 305  IPPQLSSDLERLNIEFCLRGNSGILSNISVESTLISQIKEAQQEDDELWACFQKAEGDAT 126
            IPP+L+  +E LN+    RG    L+ +  + TL+ QI+EAQ+ D ++    +  +    
Sbjct: 959  IPPELNQQMEALNLSIVSRG---FLAALEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKA 1015

Query: 125  SEFRIDSDHTLWYRDRLCVPNVSELRESVLSEAHNSSFSIH 3
            + F  D   TLW  +R+CVP+V EL++ +L EAH S +SIH
Sbjct: 1016 AGFTEDEHGTLWNGNRVCVPDVRELKQLILQEAHESRYSIH 1056


Top