BLASTX nr result

ID: Atractylodes21_contig00044305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044305
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   174   7e-42
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   163   2e-38
ref|XP_002308898.1| condensin complex components subunit [Populu...   159   2e-37
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   159   2e-37
ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia...   159   2e-37

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  174 bits (441), Expect = 7e-42
 Identities = 95/136 (69%), Positives = 104/136 (76%), Gaps = 5/136 (3%)
 Frame = +2

Query: 2   AVVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLKQYTKKLNELEPN-G 178
           A VAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLR+ASFEATL+QY KKLNEL+PN  
Sbjct: 413 AAVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLEQYKKKLNELQPNLA 472

Query: 179 SETALDASPLDSDTGNEDGEI----VDVKAGVPKEQHDSLTDSCMPQDNEQSTQMDSSVP 346
           SE+ LD  P D DT N DGE+     +    V K Q DSLTDSC+P   E   + DS VP
Sbjct: 473 SESVLDGLPSDGDTCNGDGEVDSGNEEEVGQVAKGQQDSLTDSCLPHTAEGIVENDSPVP 532

Query: 347 DVGNLEQTRTLIASLE 394
           DVGNLEQTR L+ASLE
Sbjct: 533 DVGNLEQTRALVASLE 548


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
           condensin, putative [Ricinus communis]
          Length = 1346

 Score =  163 bits (412), Expect = 2e-38
 Identities = 88/133 (66%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
 Frame = +2

Query: 2   AVVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLKQYTKKLNELEPNGS 181
           A VAAGRLEDK+A+VRK+ALNLLIMMLQHNPFGPQLR+ASFEATL+QY KKLNELEP+ S
Sbjct: 425 AAVAAGRLEDKTAMVRKAALNLLIMMLQHNPFGPQLRIASFEATLEQYKKKLNELEPDES 484

Query: 182 -ETALDASPLDSDTGNEDGEIVDVKA-GVPKEQHDSLTDSCMPQDNEQSTQMDSSVPDVG 355
            + A D    D+D  +   E+ +V A  V ++Q +SLTDSC+P   +  TQ DSSVPDVG
Sbjct: 485 AQNARDGLKSDNDASDGGDEVDNVNAEEVAEKQQESLTDSCLPHLEDGITQKDSSVPDVG 544

Query: 356 NLEQTRTLIASLE 394
           NLEQTR L+ASLE
Sbjct: 545 NLEQTRALVASLE 557


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
           gi|222854874|gb|EEE92421.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1334

 Score =  159 bits (403), Expect = 2e-37
 Identities = 91/133 (68%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
 Frame = +2

Query: 2   AVVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLKQYTKKLNELEPNGS 181
           A VAAGRLEDKSAIVRK+ALNLLIMMLQHNPFGPQLR+ASF+ATL+QY KKLNELEP+ S
Sbjct: 421 AAVAAGRLEDKSAIVRKAALNLLIMMLQHNPFGPQLRIASFQATLEQYNKKLNELEPDKS 480

Query: 182 -ETALDASPLDSDTGNEDGEIVDVKAGVP-KEQHDSLTDSCMPQDNEQSTQMDSSVPDVG 355
            E+ LD    D++T  + GE+ DV    P KEQ +SLTDS +P   E   Q DSSVPD+G
Sbjct: 481 AESVLDGLQSDNET-YDGGEVDDVNMEEPVKEQQESLTDS-VPNLEEGIPQKDSSVPDIG 538

Query: 356 NLEQTRTLIASLE 394
           NLEQTR L+ASLE
Sbjct: 539 NLEQTRALVASLE 551


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
           gi|332646086|gb|AEE79607.1| condensin complex subunit 1
           [Arabidopsis thaliana]
          Length = 1415

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   AVVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLKQYTKKLNELEPNGS 181
           A ++AGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLR+ASFEATL+QY +KLNELEP  +
Sbjct: 415 ASLSAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLEQYKRKLNELEP--T 472

Query: 182 ETALDASPLDSDTGNEDGEIVDVKAGVPKEQH-DSLTDSCMPQDNEQSTQMDSSVPDVGN 358
           E A   S  D ++ N DGEI D+      + H DSL+DSC P++ E+ ++ D SVPD+GN
Sbjct: 473 EHASKESTSDGESCNGDGEIDDLHLETTTKIHQDSLSDSCQPENGEEISEKDVSVPDIGN 532

Query: 359 LEQTRTLIASLE 394
           +EQT+ LIASLE
Sbjct: 533 VEQTKALIASLE 544


>ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana]
           gi|332646085|gb|AEE79606.1| condensin complex subunit 1
           [Arabidopsis thaliana]
          Length = 1396

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   AVVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLKQYTKKLNELEPNGS 181
           A ++AGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLR+ASFEATL+QY +KLNELEP  +
Sbjct: 415 ASLSAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLEQYKRKLNELEP--T 472

Query: 182 ETALDASPLDSDTGNEDGEIVDVKAGVPKEQH-DSLTDSCMPQDNEQSTQMDSSVPDVGN 358
           E A   S  D ++ N DGEI D+      + H DSL+DSC P++ E+ ++ D SVPD+GN
Sbjct: 473 EHASKESTSDGESCNGDGEIDDLHLETTTKIHQDSLSDSCQPENGEEISEKDVSVPDIGN 532

Query: 359 LEQTRTLIASLE 394
           +EQT+ LIASLE
Sbjct: 533 VEQTKALIASLE 544


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