BLASTX nr result

ID: Atractylodes21_contig00044224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044224
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   313   3e-83
ref|XP_002520546.1| conserved hypothetical protein [Ricinus comm...   287   1e-75
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   279   3e-73
ref|NP_193700.2| Mitochondrial transcription termination factor ...   264   1e-68
dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]           264   1e-68

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  313 bits (801), Expect = 3e-83
 Identities = 154/231 (66%), Positives = 194/231 (83%), Gaps = 3/231 (1%)
 Frame = -2

Query: 692  KNLWTAVCFLSEIRMETDKIASIVATHMEILCSNSLKGPVSVMNSLKIRQDELRLVIQKD 513
            KNLW AV FL EI M+ + I SIV++H+++LCS SLKGP +V+ SLK+ ++ L  +I++D
Sbjct: 322  KNLWQAVGFLFEIGMKVEDIVSIVSSHVQLLCSCSLKGPRTVLRSLKVGREGLCQIIKED 381

Query: 512  PLELINFATKSETKAIEH---QDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQL 342
            P EL++ A+KS+  ++EH   Q  +  +E+  FLLRLGY ENSDE+ KAL+ FRGRGDQL
Sbjct: 382  PSELLSLASKSKINSMEHVTCQSPSKHLEKTTFLLRLGYVENSDEMFKALKLFRGRGDQL 441

Query: 341  QERFDCLVEAGLDYNVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFL 162
            QERFDCLV+AGLD NVVS+MIK+APSVLNQTK ++EKKIDCL+N LGYPL++V+AFPS+L
Sbjct: 442  QERFDCLVQAGLDCNVVSNMIKQAPSVLNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYL 501

Query: 161  CYDIQRINLRFSMYLWLLERGAAKPKLSLSTILACSDIRFVKYFVDVHPEG 9
            CYDI+RINLRFSMY+WL ++GAAK  LSLSTILACSD RFVKYFVDVHPEG
Sbjct: 502  CYDIERINLRFSMYVWLRDKGAAKSNLSLSTILACSDARFVKYFVDVHPEG 552


>ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
           gi|223540260|gb|EEF41832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  287 bits (735), Expect = 1e-75
 Identities = 142/231 (61%), Positives = 181/231 (78%), Gaps = 3/231 (1%)
 Frame = -2

Query: 692 KNLWTAVCFLSEIRMETDKIASIVATHMEILCSNSLKGPVSVMNSLKIRQDELRLVIQKD 513
           KN+  A+ FL  IRM  ++IA+I+  HME+LCS SLK P SV   L + +D+L  +I++D
Sbjct: 130 KNILQALEFLLYIRMRIEEIANIIYEHMELLCSCSLKRPNSVCKELNVTKDDLCQIIRED 189

Query: 512 PLELINFATKSETKAIEH---QDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQL 342
           P++  N  +KS+ K+ E    +D +   ++  FLLRLGY ENSDE+ +AL+KFRGRGDQL
Sbjct: 190 PMKFFNLVSKSKVKSSEQILSEDQSKKRDKVAFLLRLGYVENSDEMMRALKKFRGRGDQL 249

Query: 341 QERFDCLVEAGLDYNVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFL 162
           QER+DCLV+AGLD NVVSS+I+ AP VLNQTKD++EKKIDCL   LGYPL +V+AFP++L
Sbjct: 250 QERYDCLVQAGLDCNVVSSLIRHAPMVLNQTKDVIEKKIDCLTRCLGYPLTSVVAFPTYL 309

Query: 161 CYDIQRINLRFSMYLWLLERGAAKPKLSLSTILACSDIRFVKYFVDVHPEG 9
           CYDI+RIN RF MY+WL +RGAAKP LSLSTILACSD RF KYFVD+HPEG
Sbjct: 310 CYDIERINHRFRMYVWLKDRGAAKPMLSLSTILACSDARFEKYFVDIHPEG 360


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  279 bits (714), Expect = 3e-73
 Identities = 141/231 (61%), Positives = 178/231 (77%), Gaps = 3/231 (1%)
 Frame = -2

Query: 692  KNLWTAVCFLSEIRMETDKIASIVATHMEILCSNSLKGPVSVMNSLKIRQDELRLVIQKD 513
            KNL   +  L  I M  + IA+I++T ME+LCS +LKGPV++    K ++D L  ++ ++
Sbjct: 334  KNLLRGIHILLGIGMGVEDIANIISTQMELLCSAALKGPVTLRRQFKDKKDSLCQILMEN 393

Query: 512  PLELINFATKSE---TKAIEHQDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQL 342
            PLEL +  +KSE   +K +  Q     +E+  FLLRLGY ENSDE+A+AL+ FRGRGDQL
Sbjct: 394  PLELFHLDSKSEVESSKMLSSQGPTNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQL 453

Query: 341  QERFDCLVEAGLDYNVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFL 162
            QERFDC V+AGLD NVVSS IK+AP VLNQTKD++EKKIDCL N LG  + +++AFPS+L
Sbjct: 454  QERFDCPVQAGLDCNVVSSFIKQAPMVLNQTKDVIEKKIDCLTN-LGCSVNSLVAFPSYL 512

Query: 161  CYDIQRINLRFSMYLWLLERGAAKPKLSLSTILACSDIRFVKYFVDVHPEG 9
            CYD++RINLRF MY WL E+GAAKPKLSLSTILACSD RF+KYFVDVHPEG
Sbjct: 513  CYDMERINLRFRMYTWLKEKGAAKPKLSLSTILACSDARFIKYFVDVHPEG 563


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
            [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
            Mitochondrial transcription termination factor family
            protein [Arabidopsis thaliana]
          Length = 575

 Score =  264 bits (675), Expect = 1e-68
 Identities = 132/230 (57%), Positives = 170/230 (73%), Gaps = 2/230 (0%)
 Frame = -2

Query: 692  KNLWTAVCFLSEIRMETDKIASIVATHMEILCSNSLKGPVSVMNSLKIRQDELRLVIQKD 513
            KN+   + FL  IRMET  I  I+ +HME++ S SL  P +   SL ++QDEL  +++K+
Sbjct: 334  KNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKE 393

Query: 512  PLELINFA--TKSETKAIEHQDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQ 339
            PL L  F   TK        +DS  ++E+  FLLRLGY ENSDE+ KAL++FRGRGDQLQ
Sbjct: 394  PLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQ 453

Query: 338  ERFDCLVEAGLDYNVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLC 159
            ERFDCLV+AGL+YNVV+ +I+ AP +LN +KD++EKKI  L   LGYP+E+++ FP++LC
Sbjct: 454  ERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLC 513

Query: 158  YDIQRINLRFSMYLWLLERGAAKPKLSLSTILACSDIRFVKYFVDVHPEG 9
            YD+QRI+ RFSMYLWL ER AAKP LS STIL C D RFVKYFV+VHPEG
Sbjct: 514  YDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEG 563


>dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]
          Length = 346

 Score =  264 bits (675), Expect = 1e-68
 Identities = 132/230 (57%), Positives = 170/230 (73%), Gaps = 2/230 (0%)
 Frame = -2

Query: 692 KNLWTAVCFLSEIRMETDKIASIVATHMEILCSNSLKGPVSVMNSLKIRQDELRLVIQKD 513
           KN+   + FL  IRMET  I  I+ +HME++ S SL  P +   SL ++QDEL  +++K+
Sbjct: 105 KNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKE 164

Query: 512 PLELINFA--TKSETKAIEHQDSNTFIERRNFLLRLGYTENSDELAKALRKFRGRGDQLQ 339
           PL L  F   TK        +DS  ++E+  FLLRLGY ENSDE+ KAL++FRGRGDQLQ
Sbjct: 165 PLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQ 224

Query: 338 ERFDCLVEAGLDYNVVSSMIKRAPSVLNQTKDLLEKKIDCLQNRLGYPLEAVIAFPSFLC 159
           ERFDCLV+AGL+YNVV+ +I+ AP +LN +KD++EKKI  L   LGYP+E+++ FP++LC
Sbjct: 225 ERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLC 284

Query: 158 YDIQRINLRFSMYLWLLERGAAKPKLSLSTILACSDIRFVKYFVDVHPEG 9
           YD+QRI+ RFSMYLWL ER AAKP LS STIL C D RFVKYFV+VHPEG
Sbjct: 285 YDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEG 334