BLASTX nr result

ID: Atractylodes21_contig00044208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044208
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC44142.1| putative polyprotein [Cicer arietinum]                119   3e-25
gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   4e-25
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   6e-25
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc...   118   6e-25
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]         118   6e-25

>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/128 (43%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 LDVSVSLKDRIRESRQKALFEENIKAERMI-GRVKLLSNGPDGILQIKDRVWIPRLCDLR 207
           + +S  L + I  S+   L +E  K   ++ G+      G D +L+   R+ +P +  +R
Sbjct: 269 IKISSGLLEDIANSQDDVLIQE--KRNLIVQGKTTEFKIGADNVLRCNGRICVPEITAMR 326

Query: 206 GVVLDEAHKSKYTIHPGSEKMYRNLKESYWWPGMKKSVARYVEKCLTCLQVKTEHQKPSG 27
             +L+EAHKSK +IHPG+ KMY++L+++YWWPGMKK VA YV  CLTC + K EHQ+P+G
Sbjct: 327 KTILEEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRPAG 386

Query: 26  NLQQPDIP 3
            LQ  DIP
Sbjct: 387 MLQPLDIP 394


>gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/127 (44%), Positives = 78/127 (61%)
 Frame = -3

Query: 383  LDVSVSLKDRIRESRQKALFEENIKAERMIGRVKLLSNGPDGILQIKDRVWIPRLCDLRG 204
            LD+   L+ +I E+++       +K     GR K  S     +L  K R+++P    LRG
Sbjct: 988  LDIQPLLRTQIEEAQKDNEEVREVKERLAAGRAKEFSTDEKNVLWYKKRIYVPEQGGLRG 1047

Query: 203  VVLDEAHKSKYTIHPGSEKMYRNLKESYWWPGMKKSVARYVEKCLTCLQVKTEHQKPSGN 24
            ++L EAH+S Y++HPGS KMY++LKE YWWP MK+ VA YV  C  C +VK EHQ+P+G 
Sbjct: 1048 LILKEAHESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGL 1107

Query: 23   LQQPDIP 3
            LQ   IP
Sbjct: 1108 LQPLRIP 1114


>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/127 (44%), Positives = 78/127 (61%)
 Frame = -3

Query: 383  LDVSVSLKDRIRESRQKALFEENIKAERMIGRVKLLSNGPDGILQIKDRVWIPRLCDLRG 204
            LD+   L+ +I E+++       +K     GR K  S     +L  K R+++P    LRG
Sbjct: 988  LDIQPLLRTQIEEAQKDNEEVREVKERLAAGRAKEFSTDEKDVLWYKKRIYVPEQGGLRG 1047

Query: 203  VVLDEAHKSKYTIHPGSEKMYRNLKESYWWPGMKKSVARYVEKCLTCLQVKTEHQKPSGN 24
            ++L EAH+S Y++HPGS KMY++LKE YWWP MK+ VA YV  C  C +VK EHQ+P+G 
Sbjct: 1048 LILKEAHESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGL 1107

Query: 23   LQQPDIP 3
            LQ   IP
Sbjct: 1108 LQPLRIP 1114


>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1712

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/131 (43%), Positives = 79/131 (60%)
 Frame = -3

Query: 395  RAMRLDVSVSLKDRIRESRQKALFEENIKAERMIGRVKLLSNGPDGILQIKDRVWIPRLC 216
            R   LD+   L+ +I E+++       +K     GR K  S     +L  K R+++P   
Sbjct: 1325 RINTLDIQPLLRTQIEEAQKDNEEVREVKERLAAGRAKEFSTDGKDVLWYKKRIYVPEQG 1384

Query: 215  DLRGVVLDEAHKSKYTIHPGSEKMYRNLKESYWWPGMKKSVARYVEKCLTCLQVKTEHQK 36
             LRG++L EAH+S Y++HPGS KMY++LKE YWWP MK+ VA YV  C  C +VK EHQ+
Sbjct: 1385 GLRGLILKEAHESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQR 1444

Query: 35   PSGNLQQPDIP 3
            P+G LQ   IP
Sbjct: 1445 PAGLLQPLRIP 1455


>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
          Length = 1470

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/127 (44%), Positives = 78/127 (61%)
 Frame = -3

Query: 383  LDVSVSLKDRIRESRQKALFEENIKAERMIGRVKLLSNGPDGILQIKDRVWIPRLCDLRG 204
            LD+   L+ +I E+++       +K     GR K  S     +L  K R+++P    LRG
Sbjct: 988  LDIQPLLRTQIEEAQKDNEEVREVKERLAAGRAKEFSTDEKDVLWYKKRIYVPEQGGLRG 1047

Query: 203  VVLDEAHKSKYTIHPGSEKMYRNLKESYWWPGMKKSVARYVEKCLTCLQVKTEHQKPSGN 24
            ++L EAH+S Y++HPGS KMY++LKE YWWP MK+ VA YV  C  C +VK EHQ+P+G 
Sbjct: 1048 LILKEAHESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGL 1107

Query: 23   LQQPDIP 3
            LQ   IP
Sbjct: 1108 LQPLRIP 1114


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