BLASTX nr result

ID: Atractylodes21_contig00044084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044084
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   315   7e-84
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   309   5e-82
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   304   1e-80
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
dbj|BAF01552.1| RNA helicase like protein [Arabidopsis thaliana]      300   3e-79

>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Vitis vinifera]
          Length = 572

 Score =  315 bits (807), Expect = 7e-84
 Identities = 151/199 (75%), Positives = 171/199 (85%)
 Frame = +2

Query: 182 DLKIGALVRIWVSSRQFSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKT 361
           +L+   LV +    RQFSSS+   K+DF DLT PHTWYP ARRK R VI+HVGPTNSGKT
Sbjct: 36  ELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHVGPTNSGKT 95

Query: 362 HHALKQLELSSSGVYCGPLRLLAWEVAKRLNKAKVPCDLITGQEKEVVDGARHKAATVEM 541
           HHALK+LE SSSG+YCGPLRLLAWEVAKRLNKA VPCD+ITGQE+E +DGA+HKA TVEM
Sbjct: 96  HHALKRLESSSSGIYCGPLRLLAWEVAKRLNKANVPCDMITGQEREEIDGAKHKAMTVEM 155

Query: 542 ADVTSDYDCAVIDEIQMLGCRTRGFSFTRALLGISANDLHLCGDAAAVPLIQKILSVTGD 721
           ADVTSDY CAVIDEIQMLGCRTRGFSFTRALLGIS ++LHLCGD ++VPLIQ IL VTGD
Sbjct: 156 ADVTSDYHCAVIDEIQMLGCRTRGFSFTRALLGISTDELHLCGDVSSVPLIQGILKVTGD 215

Query: 722 NVQVKFYERLSPLVPLKTP 778
           + +V++YERLSPLVPL  P
Sbjct: 216 DFEVQYYERLSPLVPLNVP 234


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 600

 Score =  309 bits (791), Expect = 5e-82
 Identities = 145/183 (79%), Positives = 165/183 (90%)
 Frame = +2

Query: 230 FSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYC 409
           +SSS G ++ DFTDLT PHTWYP ARRK R VILHVGPTNSGKTHHALKQLE S+SGVYC
Sbjct: 80  YSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPTNSGKTHHALKQLESSASGVYC 139

Query: 410 GPLRLLAWEVAKRLNKAKVPCDLITGQEKEVVDGARHKAATVEMADVTSDYDCAVIDEIQ 589
           GPLRLLAWE+AKRLNKA+VPCDLITGQE+E VDGA HKA TVEMAD+++DY CAVIDEIQ
Sbjct: 140 GPLRLLAWEIAKRLNKAQVPCDLITGQEREEVDGANHKAVTVEMADLSADYQCAVIDEIQ 199

Query: 590 MLGCRTRGFSFTRALLGISANDLHLCGDAAAVPLIQKILSVTGDNVQVKFYERLSPLVPL 769
           M+GC TRG+SFTRALLGI+A++LHLCGD AAVPLIQ+IL +TGD ++V+FYERLSPLVPL
Sbjct: 200 MIGCTTRGYSFTRALLGIAADELHLCGDPAAVPLIQEILKITGDEIEVQFYERLSPLVPL 259

Query: 770 KTP 778
             P
Sbjct: 260 NVP 262


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 565

 Score =  304 bits (779), Expect = 1e-80
 Identities = 141/183 (77%), Positives = 164/183 (89%)
 Frame = +2

Query: 230 FSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYC 409
           +SS  G ++ DFTDLT PHTWYP AR+K R +ILHVGPTNSGKTHHALKQLE S+SGVYC
Sbjct: 45  YSSRNGPIRNDFTDLTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYC 104

Query: 410 GPLRLLAWEVAKRLNKAKVPCDLITGQEKEVVDGARHKAATVEMADVTSDYDCAVIDEIQ 589
           GPLRLLAWE+AKRLNKA+VPCDLITGQE++ VDGA HKA TVEM DV++DY CAVIDEIQ
Sbjct: 105 GPLRLLAWEIAKRLNKAQVPCDLITGQERDEVDGANHKAVTVEMVDVSADYQCAVIDEIQ 164

Query: 590 MLGCRTRGFSFTRALLGISANDLHLCGDAAAVPLIQKILSVTGDNVQVKFYERLSPLVPL 769
           M+GC TRG+SFTRALLGI+A++LHLCGD AAVPLIQ+I+ +TGD ++V+FYERLSPLVPL
Sbjct: 165 MIGCITRGYSFTRALLGIAADELHLCGDPAAVPLIQEIMKITGDEIEVQFYERLSPLVPL 224

Query: 770 KTP 778
           K P
Sbjct: 225 KVP 227


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  300 bits (767), Expect = 3e-79
 Identities = 146/199 (73%), Positives = 168/199 (84%), Gaps = 2/199 (1%)
 Frame = +2

Query: 188 KIGALVRIWVSSRQFSSSTG--AVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKT 361
           ++GAL  +    R++S+S    A K DF DLT PH WYP+ARRK R + LHVGPTNSGKT
Sbjct: 34  RLGALAGVCNLLREYSTSNDNRAHKFDFLDLTCPHAWYPVARRKNRKIFLHVGPTNSGKT 93

Query: 362 HHALKQLELSSSGVYCGPLRLLAWEVAKRLNKAKVPCDLITGQEKEVVDGARHKAATVEM 541
           +HALKQLE S SGVYCGPLRLLAWEVAKRLNKA VPCDLITGQE+E V+GA+HKA TVEM
Sbjct: 94  YHALKQLESSPSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEVNGAKHKAVTVEM 153

Query: 542 ADVTSDYDCAVIDEIQMLGCRTRGFSFTRALLGISANDLHLCGDAAAVPLIQKILSVTGD 721
           ADVTS+Y CAV+DEIQMLGC TRGFSFTRALLGISA++LHLCGD AAVPLIQ+IL  TGD
Sbjct: 154 ADVTSNYSCAVVDEIQMLGCMTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKPTGD 213

Query: 722 NVQVKFYERLSPLVPLKTP 778
           ++ V++YERLSPLVP + P
Sbjct: 214 DIHVQYYERLSPLVPSQKP 232


>dbj|BAF01552.1| RNA helicase like protein [Arabidopsis thaliana]
          Length = 571

 Score =  300 bits (767), Expect = 3e-79
 Identities = 151/231 (65%), Positives = 180/231 (77%), Gaps = 12/231 (5%)
 Frame = +2

Query: 122 STVSRTRFCNAHMHASWLL-WDLKIGALVRIWVSSRQFSSSTGAVKIDFT---------- 268
           S +  +R   A   + W   ++ + G L+R+ V +R +  ++G+ K DFT          
Sbjct: 12  SALGISRVLQADKGSLWRFHFEPEFGDLLRLGVLTRNYRKNSGSPKFDFTGTGTTSKFDF 71

Query: 269 -DLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYCGPLRLLAWEVAK 445
            DLT PHTWYPIAR+KKR VILHVGPTNSGKT+ ALK LE SSSGVYCGPLRLLAWEVAK
Sbjct: 72  TDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGPLRLLAWEVAK 131

Query: 446 RLNKAKVPCDLITGQEKEVVDGARHKAATVEMADVTSDYDCAVIDEIQMLGCRTRGFSFT 625
           RLNKA VPCDLITGQEK++V+GA HKA TVEMADVTS YDCA+IDEIQM+GC+ RGF+FT
Sbjct: 132 RLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFAFT 191

Query: 626 RALLGISANDLHLCGDAAAVPLIQKILSVTGDNVQVKFYERLSPLVPLKTP 778
           RALLGI+A++LHLCGD A VPL++ IL VTGD+V+V  YERLSPLVPLK P
Sbjct: 192 RALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPLVPLKVP 242


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