BLASTX nr result

ID: Atractylodes21_contig00044062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044062
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   137   7e-31
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   137   1e-30
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   134   6e-30

>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
           predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = -3

Query: 230 LEDILEITGYKLTPFNQIDDYGQEKLWKTQRQLVPRKRKNQITVLVEDALSQSSFENYSS 51
           LED+LE+TGYKLT FNQIDDYGQEK+WKTQRQLVPRKRKNQIT LVEDAL++SSFENYSS
Sbjct: 367 LEDVLEMTGYKLTSFNQIDDYGQEKMWKTQRQLVPRKRKNQITTLVEDALNKSSFENYSS 426

Query: 50  KARDSLSCWTPDSIGF 3
           +ARDSL+CW PD IGF
Sbjct: 427 RARDSLACWMPDCIGF 442


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = -3

Query: 230 LEDILEITGYKLTPFNQIDDYGQEKLWKTQRQLVPRKRKNQITVLVEDALSQSSFENYSS 51
           LED+LE+TGYKLT FNQIDDYGQEK+WKTQ+QLVPRKRKN+IT LVEDAL++SSFENYSS
Sbjct: 426 LEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSS 485

Query: 50  KARDSLSCWTPDSIGF 3
             RDSLSCWTPD +GF
Sbjct: 486 GVRDSLSCWTPDCMGF 501


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/76 (82%), Positives = 71/76 (93%)
 Frame = -3

Query: 230 LEDILEITGYKLTPFNQIDDYGQEKLWKTQRQLVPRKRKNQITVLVEDALSQSSFENYSS 51
           LED+LE+TGYKLT FNQIDDYGQEK+WKTQ+QLVPRKRKN+IT LVEDAL++SSFENYSS
Sbjct: 426 LEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSS 485

Query: 50  KARDSLSCWTPDSIGF 3
             RDSLSCWTPD +GF
Sbjct: 486 GVRDSLSCWTPDCMGF 501


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/76 (85%), Positives = 69/76 (90%)
 Frame = -3

Query: 230 LEDILEITGYKLTPFNQIDDYGQEKLWKTQRQLVPRKRKNQITVLVEDALSQSSFENYSS 51
           LEDILE+TGYKLT FNQIDDYGQEKLWKTQ+QL PRKRKNQIT LVEDALS SSFENYSS
Sbjct: 451 LEDILEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQITALVEDALSNSSFENYSS 510

Query: 50  KARDSLSCWTPDSIGF 3
           +ARDSL+ W PD IGF
Sbjct: 511 RARDSLTSWAPDCIGF 526


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/76 (80%), Positives = 70/76 (92%)
 Frame = -3

Query: 230 LEDILEITGYKLTPFNQIDDYGQEKLWKTQRQLVPRKRKNQITVLVEDALSQSSFENYSS 51
           LED+LE+TGYKLT FNQIDDYGQ+K+WKTQRQL PRKRKNQI  LVEDAL++SSFE+YSS
Sbjct: 420 LEDVLEMTGYKLTSFNQIDDYGQDKMWKTQRQLAPRKRKNQIATLVEDALNKSSFESYSS 479

Query: 50  KARDSLSCWTPDSIGF 3
           +ARDSL+CW PD IGF
Sbjct: 480 RARDSLACWMPDCIGF 495


Top