BLASTX nr result

ID: Atractylodes21_contig00043944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043944
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis tha...   177   6e-43
ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-contain...   177   1e-42
gb|ACB59206.1| transducin family protein [Brassica oleracea]          177   1e-42
ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ric...   175   4e-42
ref|XP_003519800.1| PREDICTED: uncharacterized WD repeat-contain...   173   1e-41

>ref|NP_173823.1| WD40 domain-containing protein [Arabidopsis thaliana]
           gi|2829890|gb|AAC00598.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192360|gb|AEE30481.1| WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 415

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/115 (72%), Positives = 96/115 (83%)
 Frame = -3

Query: 345 KIITTLPTLKDRLTKLLFAKNYVEIRRHKKFTWVHHIDAVSSLAVSIDKSLIYSASWDRS 166
           K + TLPT+ DR   L  +K+YVE+RRHKK TWVHH+DAVSSLA+S D SL+YSASWDRS
Sbjct: 156 KCVATLPTMNDRFKTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRS 215

Query: 165 FKVWRVSDFKCLESVSNAHDDAINAIVLSDDGFVYTGSADKKIKAWRNNIRDKKH 1
           FK+WR SDFKCL+S+  AHDDAINAIV+S DGFVYTGSADKKIK W  N +DKKH
Sbjct: 216 FKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVW--NKKDKKH 268


>ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Glycine max]
          Length = 433

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/118 (68%), Positives = 99/118 (83%)
 Frame = -3

Query: 354 NELKIITTLPTLKDRLTKLLFAKNYVEIRRHKKFTWVHHIDAVSSLAVSIDKSLIYSASW 175
           N  K + TLPTL DR++KL  +KNYVEIRRHKK TWVHH+D VS+LA+S D SL+YSASW
Sbjct: 165 NYYKCVATLPTLHDRISKLFSSKNYVEIRRHKKRTWVHHVDTVSALALSRDGSLLYSASW 224

Query: 174 DRSFKVWRVSDFKCLESVSNAHDDAINAIVLSDDGFVYTGSADKKIKAWRNNIRDKKH 1
           DR+FK+WR SDFKCLESV NAH+DAIN++VLS++GFVYTGSAD +IK W+    +KKH
Sbjct: 225 DRTFKIWRTSDFKCLESVKNAHEDAINSLVLSNNGFVYTGSADTRIKMWKKLEGEKKH 282


>gb|ACB59206.1| transducin family protein [Brassica oleracea]
          Length = 410

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = -3

Query: 354 NELKIITTLPTLKDRLTKLLFAKNYVEIRRHKKFTWVHHIDAVSSLAVSIDKSLIYSASW 175
           N+ K + TLPT+ DR T L   K+YVE+RRHKK TWVHH+DAVSSLA+S+D SL+YSASW
Sbjct: 143 NKYKCVATLPTMNDRFTSLFSQKSYVEVRRHKKSTWVHHVDAVSSLALSLDGSLLYSASW 202

Query: 174 DRSFKVWRVSDFKCLESVSNAHDDAINAIVLSDDGFVYTGSADKKIKAWRNNIRDKKH 1
           DRSFK+WR SDFKCLES+  AHDDAINAIV+S DGF YTGS DK IK W  N +DK H
Sbjct: 203 DRSFKIWRASDFKCLESIEKAHDDAINAIVVSRDGFCYTGSGDKTIKVW--NKKDKSH 258


>ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540704|gb|EEF42267.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 431

 Score =  175 bits (443), Expect = 4e-42
 Identities = 77/113 (68%), Positives = 94/113 (83%)
 Frame = -3

Query: 339 ITTLPTLKDRLTKLLFAKNYVEIRRHKKFTWVHHIDAVSSLAVSIDKSLIYSASWDRSFK 160
           I TLPT+ DR  +   +KNYV++RRHKK TWVHH+D VS+LAVS D S ++SASWDR+FK
Sbjct: 165 IATLPTMNDRFLRFFSSKNYVQVRRHKKCTWVHHVDTVSALAVSKDGSFLFSASWDRTFK 224

Query: 159 VWRVSDFKCLESVSNAHDDAINAIVLSDDGFVYTGSADKKIKAWRNNIRDKKH 1
           +WR SDF+CLESV+NAHDDAIN +VLS+DGFVYTGSADKKIK W+    +KKH
Sbjct: 225 IWRTSDFRCLESVANAHDDAINTLVLSNDGFVYTGSADKKIKVWKKQAGEKKH 277


>ref|XP_003519800.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Glycine max]
          Length = 439

 Score =  173 bits (438), Expect = 1e-41
 Identities = 79/118 (66%), Positives = 97/118 (82%)
 Frame = -3

Query: 354 NELKIITTLPTLKDRLTKLLFAKNYVEIRRHKKFTWVHHIDAVSSLAVSIDKSLIYSASW 175
           N  K + +LPTL DR +KL  ++NYVEIRRHKK TWVHH+D VS+LA+S D SL+YSASW
Sbjct: 168 NYYKCVASLPTLHDRFSKLFSSENYVEIRRHKKRTWVHHVDTVSALALSQDGSLLYSASW 227

Query: 174 DRSFKVWRVSDFKCLESVSNAHDDAINAIVLSDDGFVYTGSADKKIKAWRNNIRDKKH 1
           DR+FK+WR SDFKCLESV NAH+DAIN+++LS++G VYTGSAD KIK W+    DKKH
Sbjct: 228 DRTFKIWRTSDFKCLESVKNAHEDAINSLILSNNGIVYTGSADTKIKMWKKLEGDKKH 285


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