BLASTX nr result

ID: Atractylodes21_contig00043935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043935
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34941.3| unnamed protein product [Vitis vinifera]              176   8e-42
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   172   2e-40
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...   162   1e-37
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   162   2e-37
ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thalia...   160   5e-37

>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  176 bits (447), Expect = 8e-42
 Identities = 118/279 (42%), Positives = 156/279 (55%), Gaps = 22/279 (7%)
 Frame = +1

Query: 7    PPQNGDAALLL-------------LSETKKWVNSHDGSTDFQPSEKQGTNETP--SKVER 141
            PP   DA LLL             L++  +      GS     S     NET   S+ ++
Sbjct: 1591 PPYISDATLLLVPSGELKATGDMMLAQGNRIPAGGSGSFSDNSSRDSAANETSAASRTDK 1650

Query: 142  LKPKGTNAKSSLKNRSPV----RIC---QSSLKPLIGRVLEILRLLKINLFDIETALPKE 300
               +  + K SL N  P     R C   QSSL+PL+G+V +ILR LKINL D++ ALP+E
Sbjct: 1651 SALEQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQILRQLKINLLDMDAALPEE 1710

Query: 301  ALRPTRGGLDRLRAWRGFVKSAQSIYEMVQATIILEDMIKTEYLRKEWWYWASPSTAAKI 480
            AL+P+R  L++  AWR FVKSA++I+EMVQATI+LEDMIKTEYL   WWYW+S S AAK 
Sbjct: 1711 ALKPSRADLEKRLAWRAFVKSAETIFEMVQATIMLEDMIKTEYLMNGWWYWSSLSAAAKT 1770

Query: 481  SNISALALRIYALDAAIYYNKPPTSNLDPTEPITPXXXXXXXXXXXXXNAKDPXXXXXXX 660
            S +S+LALRIY+LDAAI Y K  +SNLD T+   P             +  DP       
Sbjct: 1771 STVSSLALRIYSLDAAIAYEK-ISSNLDLTDSPKP------------SSKPDP------- 1810

Query: 661  XXXPVTDSKPAEPSRPKTRSKKRMRDSDS*KVIKSWAFL 777
               PV +    E S+   +  KR ++S+  +VI SW +L
Sbjct: 1811 --KPVPNLDTMEKSKLGRKQNKRRKESE--EVIASWKWL 1845


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  172 bits (435), Expect = 2e-40
 Identities = 104/215 (48%), Positives = 133/215 (61%), Gaps = 22/215 (10%)
 Frame = +1

Query: 7    PPQNGDAALLL-------------LSETKKWVNSHDGSTDFQPSEKQGTNETP--SKVER 141
            PP   DA LLL             L++  +      GS     S     NET   S+ ++
Sbjct: 1918 PPYISDATLLLVPSGELKATGDMMLAQGNRIPAGGSGSFSDNSSRDSAANETSAASRTDK 1977

Query: 142  LKPKGTNAKSSLKNRSPV----RIC---QSSLKPLIGRVLEILRLLKINLFDIETALPKE 300
               +  + K SL N  P     R C   QSSL+PL+G+V +ILR LKINL D++ ALP+E
Sbjct: 1978 SALEQKDKKYSLNNNGPEMEVGRCCVIPQSSLRPLVGKVYQILRQLKINLLDMDAALPEE 2037

Query: 301  ALRPTRGGLDRLRAWRGFVKSAQSIYEMVQATIILEDMIKTEYLRKEWWYWASPSTAAKI 480
            AL+P+R  L++  AWR FVKSA++I+EMVQATI+LEDMIKTEYL   WWYW+S S AAK 
Sbjct: 2038 ALKPSRADLEKRLAWRAFVKSAETIFEMVQATIMLEDMIKTEYLMNGWWYWSSLSAAAKT 2097

Query: 481  SNISALALRIYALDAAIYYNKPPTSNLDPTEPITP 585
            S +S+LALRIY+LDAAI Y K  +SNLD T+   P
Sbjct: 2098 STVSSLALRIYSLDAAIAYEK-ISSNLDLTDSPKP 2131


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score =  162 bits (411), Expect = 1e-37
 Identities = 89/194 (45%), Positives = 125/194 (64%), Gaps = 6/194 (3%)
 Frame = +1

Query: 16   NGDAALLLLSETKKWVNSHDGSTDFQPSEKQGTNETPSKVERLKPKGTNAKSSLKNRSPV 195
            +GD  +    ET     + + +  F  S         +K+  L    +  K+   + S +
Sbjct: 1955 SGDQVIFAGPETNVEGLNSESNLSFDGSVTDNHGGPLNKLTGLGFGFSEQKNKKSSGSGL 2014

Query: 196  RIC----QSSLKPLIGRVLEILRLLKINLFDIETALPKEALRPTRGGLDRLRAWRGFVKS 363
            + C    Q++LK + G+ L + R LK NL D++ ALP+EALRP++   DR RAWR FVKS
Sbjct: 2015 KSCCVVPQAALKRITGKALPVFRFLKTNLLDMDVALPEEALRPSKSHPDRRRAWRVFVKS 2074

Query: 364  AQSIYEMVQATIILEDMIKTEYLRKEWWYWASPSTAAKISNISALALRIYALDAAIYYNK 543
            AQSIYE+VQAT ++EDMIKTEYL+ EWWYW+S S AAKIS +SAL++RI++LDAAI Y+K
Sbjct: 2075 AQSIYELVQATFVVEDMIKTEYLKNEWWYWSSLSAAAKISTLSALSVRIFSLDAAIIYDK 2134

Query: 544  P--PTSNLDPTEPI 579
            P  P+ + D T+PI
Sbjct: 2135 PITPSDHNDETKPI 2148


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  162 bits (409), Expect = 2e-37
 Identities = 86/156 (55%), Positives = 109/156 (69%), Gaps = 3/156 (1%)
 Frame = +1

Query: 112  TNETPSKVERLKPKGTNAKSSLKNRSPVRIC---QSSLKPLIGRVLEILRLLKINLFDIE 282
            TN+ P    + + K ++         P   C   +SSL PL+G+V  ILR LKINL D+E
Sbjct: 1954 TNKPPLGCLQRRGKKSSLGKCFPEMGPGCCCVVPESSLMPLVGKVSSILRQLKINLLDME 2013

Query: 283  TALPKEALRPTRGGLDRLRAWRGFVKSAQSIYEMVQATIILEDMIKTEYLRKEWWYWASP 462
             ALP+EALRP +G L R  AWR +VKSA+SIY+MV+ATI+LE+MIKTEYLR EWWYW+S 
Sbjct: 2014 AALPEEALRPAKGQLGRRWAWRAYVKSAESIYQMVRATIMLEEMIKTEYLRNEWWYWSSL 2073

Query: 463  STAAKISNISALALRIYALDAAIYYNKPPTSNLDPT 570
            S AAK S +++LALRIY+LDA I Y K   SN DP+
Sbjct: 2074 SAAAKTSTVASLALRIYSLDACIVYEK--NSNSDPS 2107


>ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thaliana]
            gi|75337201|sp|Q9SGH2.1|MBD9_ARATH RecName:
            Full=Methyl-CpG-binding domain-containing protein 9;
            Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl
            tranferase MBD9; AltName: Full=Methyl-CpG-binding protein
            MBD9 gi|6692266|gb|AAF24616.1|AC010870_9 unknown protein
            [Arabidopsis thaliana] gi|332640148|gb|AEE73669.1|
            methyl-CPG-binding domain 9 [Arabidopsis thaliana]
          Length = 2176

 Score =  160 bits (406), Expect = 5e-37
 Identities = 89/182 (48%), Positives = 122/182 (67%), Gaps = 2/182 (1%)
 Frame = +1

Query: 40   LSETKKWVNSHDGSTDFQPSEKQGTNETPSKVERLKPKGTNAKSSLKNRSPVRICQSSLK 219
            +S  +   +SH G  D       G +E  +K    K  G+  KS         + Q++LK
Sbjct: 1971 MSFDRSVTDSHGGPLDKPSGLGFGFSEQKNK----KSSGSGLKSCCV------VPQAALK 2020

Query: 220  PLIGRVLEILRLLKINLFDIETALPKEALRPTRGGLDRLRAWRGFVKSAQSIYEMVQATI 399
             + G+ L   R LK NL D++ ALP+EALRP++   +R RAWR FVKS+QSIYE+VQATI
Sbjct: 2021 RVTGKALPGFRFLKTNLLDMDVALPEEALRPSKSHPNRRRAWRVFVKSSQSIYELVQATI 2080

Query: 400  ILEDMIKTEYLRKEWWYWASPSTAAKISNISALALRIYALDAAIYYNKP--PTSNLDPTE 573
            ++EDMIKTEYL+ EWWYW+S S AAKIS +SAL++RI++LDAAI Y+KP  P++ +D T+
Sbjct: 2081 VVEDMIKTEYLKNEWWYWSSLSAAAKISTLSALSVRIFSLDAAIIYDKPITPSNPIDETK 2140

Query: 574  PI 579
            PI
Sbjct: 2141 PI 2142


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