BLASTX nr result

ID: Atractylodes21_contig00043906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043906
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002529964.1| gtpase activating protein, putative [Ricinus...    67   2e-09
ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-l...    67   2e-09
emb|CBI38689.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]    67   2e-09

>ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|222843156|gb|EEE80703.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = +1

Query: 130 SNHNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTDVHHLSHVTFDRFNGFLGLP 309
           SN  F               TC++    DVSSS+DI +PT+V H+SHVTFDRFNGFLGLP
Sbjct: 10  SNKEFAFLDIFVTALRKSLVTCSVERD-DVSSSMDISWPTEVKHVSHVTFDRFNGFLGLP 68

Query: 310 LALQPD 327
             L+P+
Sbjct: 69  TELEPE 74


>ref|XP_002529964.1| gtpase activating protein, putative [Ricinus communis]
           gi|223530526|gb|EEF32407.1| gtpase activating protein,
           putative [Ricinus communis]
          Length = 511

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
 Frame = +1

Query: 88  STPFISPRHQ----GPAQSNHN------FTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDI 237
           STPFISP  +    G    N+N      F I             TC++   +DV S +DI
Sbjct: 68  STPFISPGSRFGGRGGRNGNNNSNNSNQFAIVDILVTALRKSIVTCSVER-EDVCS-MDI 125

Query: 238 GFPTDVHHLSHVTFDRFNGFLGLPLALQPD 327
            +PTDV H+SHVTFDRFNGFLGLP   +PD
Sbjct: 126 SWPTDVKHVSHVTFDRFNGFLGLPTEFEPD 155


>ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-like [Vitis vinifera]
          Length = 474

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +1

Query: 88  STPFISP--RHQGPAQSN---HNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTD 252
           STPFI    R  G A      H F I             TC++   +DVS+ +DI +PT+
Sbjct: 49  STPFIGAGSRESGSANGQSQGHQFPILPILLAALRKSLVTCSVER-EDVSA-VDISWPTN 106

Query: 253 VHHLSHVTFDRFNGFLGLPLALQPD 327
           V H+SHVTFDRFNGFLGLP+ L+P+
Sbjct: 107 VQHVSHVTFDRFNGFLGLPVELEPE 131


>emb|CBI38689.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +1

Query: 88  STPFISP--RHQGPAQSN---HNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTD 252
           STPFI    R  G A      H F I             TC++   +DVS+ +DI +PT+
Sbjct: 49  STPFIGAGSRESGSANGQSQGHQFPILPILLAALRKSLVTCSVER-EDVSA-VDISWPTN 106

Query: 253 VHHLSHVTFDRFNGFLGLPLALQPD 327
           V H+SHVTFDRFNGFLGLP+ L+P+
Sbjct: 107 VQHVSHVTFDRFNGFLGLPVELEPE 131


>emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]
          Length = 546

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +1

Query: 88  STPFISP--RHQGPAQSN---HNFTIXXXXXXXXXXXXXTCTLHHSQDVSSSLDIGFPTD 252
           STPFI    R  G A      H F I             TC++   +DVS+ +DI +PT+
Sbjct: 49  STPFIGAGSRESGSANGQSQGHQFPILPILLAALRKSLVTCSVER-EDVSA-VDISWPTN 106

Query: 253 VHHLSHVTFDRFNGFLGLPLALQPD 327
           V H+SHVTFDRFNGFLGLP+ L+P+
Sbjct: 107 VQHVSHVTFDRFNGFLGLPVELEPE 131


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