BLASTX nr result

ID: Atractylodes21_contig00043883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043883
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_176256.2| SWIM zinc finger-like protein [Arabidopsis thal...    49   3e-08
gb|AAB71951.1| Hypothetical Protein [Arabidopsis thaliana]             49   3e-08
ref|NP_974054.1| SWIM zinc finger-like protein [Arabidopsis thal...    49   3e-08
ref|XP_002886608.1| predicted protein [Arabidopsis lyrata subsp....    48   2e-07

>ref|NP_176256.2| SWIM zinc finger-like protein [Arabidopsis thaliana]
           gi|19715655|gb|AAL91647.1| At1g60560/F8A5_10
           [Arabidopsis thaliana] gi|27363242|gb|AAO11540.1|
           At1g60560/F8A5_10 [Arabidopsis thaliana]
           gi|332195577|gb|AEE33698.1| SWIM zinc finger-like
           protein [Arabidopsis thaliana]
          Length = 703

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -2

Query: 189 LEKFTQDFVDRADFIQYFTATWVPKIG 109
           LEK TQDFVD+  F+QYFT+TW+PKIG
Sbjct: 430 LEKLTQDFVDQTAFMQYFTSTWLPKIG 456



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 292 VKNCRNIVVQREIFFKRRGEIVYSIWGRITCFCSLREVHPRF 167
           VK C +I VQR++F K  GE+VYSIW  +    +L ++   F
Sbjct: 397 VKKCDSIEVQRDLF-KCLGELVYSIWDGVDTTKALEKLTQDF 437


>gb|AAB71951.1| Hypothetical Protein [Arabidopsis thaliana]
          Length = 653

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -2

Query: 189 LEKFTQDFVDRADFIQYFTATWVPKIG 109
           LEK TQDFVD+  F+QYFT+TW+PKIG
Sbjct: 380 LEKLTQDFVDQTAFMQYFTSTWLPKIG 406



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 292 VKNCRNIVVQREIFFKRRGEIVYSIWGRITCFCSLREVHPRF 167
           VK C +I VQR++F K  GE+VYSIW  +    +L ++   F
Sbjct: 347 VKKCDSIEVQRDLF-KCLGELVYSIWDGVDTTKALEKLTQDF 387


>ref|NP_974054.1| SWIM zinc finger-like protein [Arabidopsis thaliana]
           gi|332195576|gb|AEE33697.1| SWIM zinc finger-like
           protein [Arabidopsis thaliana]
          Length = 500

 Score = 48.9 bits (115), Expect(2) = 3e-08
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -2

Query: 189 LEKFTQDFVDRADFIQYFTATWVPKIG 109
           LEK TQDFVD+  F+QYFT+TW+PKIG
Sbjct: 430 LEKLTQDFVDQTAFMQYFTSTWLPKIG 456



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 292 VKNCRNIVVQREIFFKRRGEIVYSIWGRITCFCSLREVHPRF 167
           VK C +I VQR++F K  GE+VYSIW  +    +L ++   F
Sbjct: 397 VKKCDSIEVQRDLF-KCLGELVYSIWDGVDTTKALEKLTQDF 437


>ref|XP_002886608.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332449|gb|EFH62867.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 703

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -2

Query: 189 LEKFTQDFVDRADFIQYFTATWVPKIG 109
           LE+ TQDFVD+  F+QYFT+TW+PKIG
Sbjct: 430 LERLTQDFVDQTAFMQYFTSTWLPKIG 456



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -1

Query: 292 VKNCRNIVVQREIFFKRRGEIVYSIW 215
           VK C ++ VQR++F K  GE+VYSIW
Sbjct: 397 VKKCDSLEVQRDLF-KCLGELVYSIW 421


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