BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043877
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466349.1| hypothetical protein SORBIDRAFT_01g006185 [S...   209   4e-52
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po...   208   8e-52
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...   208   8e-52
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...   208   8e-52
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   207   1e-51

>ref|XP_002466349.1| hypothetical protein SORBIDRAFT_01g006185 [Sorghum bicolor]
           gi|241920203|gb|EER93347.1| hypothetical protein
           SORBIDRAFT_01g006185 [Sorghum bicolor]
          Length = 557

 Score =  209 bits (531), Expect = 4e-52
 Identities = 105/191 (54%), Positives = 129/191 (67%)
 Frame = +3

Query: 60  AAQNPTRHSMMTRSRAGITKPNPKYAFHTLSQSISTLPTSHIDALRDRNWANAMHDEFNA 239
           AA  P RH M+TR++AGI KPNPKY     + + +  PT     LRD  W  AM +EFNA
Sbjct: 91  AAAPPQRHPMVTRAQAGIHKPNPKYVHVATTPAPAPPPTGVRAVLRDPEWLAAMQEEFNA 150

Query: 240 LIKNDRWELVPRPSGVNVIRCMWAFTYKLRANGVLERHKARLVVNGRSQQVGVDCYETFS 419
           L  N+ W LVPRP+  NVI   W F  KL  +G LER KAR VV G SQ+  +D ++TFS
Sbjct: 151 LQNNNTWTLVPRPAQANVITGKWLFKNKLNPDGTLERRKARWVVGGFSQRPSIDFHQTFS 210

Query: 420 PVVKPAMIRTVLNLALSKQWGIHQLDVKNVFLHGTLNETVFMHQPPGFKNARLLDHVCRL 599
           PVVKPA +RTVL+LA +++W +HQLD+KN FLHG L E V+ HQP GF +    +HVC L
Sbjct: 211 PVVKPATVRTVLHLAATRRWTVHQLDIKNAFLHGDLAERVYCHQPAGFVDPDCPNHVCLL 270

Query: 600 KKSLYGLKQAP 632
            KSLYGLKQAP
Sbjct: 271 VKSLYGLKQAP 281


>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  208 bits (529), Expect = 8e-52
 Identities = 109/195 (55%), Positives = 132/195 (67%)
 Frame = +3

Query: 48   TVPTAAQNPTRHSMMTRSRAGITKPNPKYAFHTLSQSISTLPTSHIDALRDRNWANAMHD 227
            T   A+ +P RH+M TR+RAGI+KPNP+YA  T + ++S  P+S   ALRD NW  AM  
Sbjct: 757  TSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNWRAAMQA 815

Query: 228  EFNALIKNDRWELVPRPSGVNVIRCMWAFTYKLRANGVLERHKARLVVNGRSQQVGVDCY 407
            EF+AL+ N  W LVPRP G  +I   W F  KL A+G L+++KAR VV G +Q+ GVD  
Sbjct: 816  EFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVDFG 875

Query: 408  ETFSPVVKPAMIRTVLNLALSKQWGIHQLDVKNVFLHGTLNETVFMHQPPGFKNARLLDH 587
            ETFSPVVKPA IRTVL L  SKQW  HQLDV N FLHG L E V   QP GF++A     
Sbjct: 876  ETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARPAD 935

Query: 588  VCRLKKSLYGLKQAP 632
            VC L +SLYGL+QAP
Sbjct: 936  VCLLSRSLYGLRQAP 950


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1414

 Score =  208 bits (529), Expect = 8e-52
 Identities = 109/195 (55%), Positives = 132/195 (67%)
 Frame = +3

Query: 48   TVPTAAQNPTRHSMMTRSRAGITKPNPKYAFHTLSQSISTLPTSHIDALRDRNWANAMHD 227
            T   A+ +P RH+M TR+RAGI+KPNP+YA  T + ++S  P+S   ALRD NW  AM  
Sbjct: 855  TSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNWRAAMQA 913

Query: 228  EFNALIKNDRWELVPRPSGVNVIRCMWAFTYKLRANGVLERHKARLVVNGRSQQVGVDCY 407
            EF+AL+ N  W LVPRP G  +I   W F  KL A+G L+++KAR VV G +Q+ GVD  
Sbjct: 914  EFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVDFG 973

Query: 408  ETFSPVVKPAMIRTVLNLALSKQWGIHQLDVKNVFLHGTLNETVFMHQPPGFKNARLLDH 587
            ETFSPVVKPA IRTVL L  SKQW  HQLDV N FLHG L E V   QP GF++A     
Sbjct: 974  ETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARPAD 1033

Query: 588  VCRLKKSLYGLKQAP 632
            VC L +SLYGL+QAP
Sbjct: 1034 VCLLSRSLYGLRQAP 1048


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score =  208 bits (529), Expect = 8e-52
 Identities = 109/195 (55%), Positives = 132/195 (67%)
 Frame = +3

Query: 48   TVPTAAQNPTRHSMMTRSRAGITKPNPKYAFHTLSQSISTLPTSHIDALRDRNWANAMHD 227
            T   A+ +P RH+M TR+RAGI+KPNP+YA  T + ++S  P+S   ALRD NW  AM  
Sbjct: 855  TSSPASASPPRHAMTTRARAGISKPNPRYAM-TATSTLSPTPSSVRAALRDPNWRAAMQA 913

Query: 228  EFNALIKNDRWELVPRPSGVNVIRCMWAFTYKLRANGVLERHKARLVVNGRSQQVGVDCY 407
            EF+AL+ N  W LVPRP G  +I   W F  KL A+G L+++KAR VV G +Q+ GVD  
Sbjct: 914  EFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVDFG 973

Query: 408  ETFSPVVKPAMIRTVLNLALSKQWGIHQLDVKNVFLHGTLNETVFMHQPPGFKNARLLDH 587
            ETFSPVVKPA IRTVL L  SKQW  HQLDV N FLHG L E V   QP GF++A     
Sbjct: 974  ETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARPAD 1033

Query: 588  VCRLKKSLYGLKQAP 632
            VC L +SLYGL+QAP
Sbjct: 1034 VCLLSRSLYGLRQAP 1048


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  207 bits (528), Expect = 1e-51
 Identities = 102/184 (55%), Positives = 131/184 (71%)
 Frame = +3

Query: 81   HSMMTRSRAGITKPNPKYAFHTLSQSISTLPTSHIDALRDRNWANAMHDEFNALIKNDRW 260
            H+M TR +AG+ KP  +   H  + ++S +P ++  AL D  W  AM +EF AL  N  W
Sbjct: 1055 HTMTTRGKAGVRKPVQRLNLH--ASTLSPVPRTYRAALADPYWRTAMEEEFTALTANRTW 1112

Query: 261  ELVPRPSGVNVIRCMWAFTYKLRANGVLERHKARLVVNGRSQQVGVDCYETFSPVVKPAM 440
            +LVPRPSG NV+   W F +K +++G L+R+KAR V+ G SQ++G+D  ETFSPVVKPA 
Sbjct: 1113 DLVPRPSGANVVTGKWIFKHKFQSDGTLDRYKARWVLRGFSQRLGIDFDETFSPVVKPAT 1172

Query: 441  IRTVLNLALSKQWGIHQLDVKNVFLHGTLNETVFMHQPPGFKNARLLDHVCRLKKSLYGL 620
            +RTVL+LA+S+ W IHQLDVKN FLHGTL ETV+  QPPGF +    D VCRL KSLYGL
Sbjct: 1173 VRTVLSLAVSRDWPIHQLDVKNAFLHGTLQETVYCIQPPGFVDPTRPDMVCRLNKSLYGL 1232

Query: 621  KQAP 632
            KQAP
Sbjct: 1233 KQAP 1236