BLASTX nr result

ID: Atractylodes21_contig00043873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043873
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    73   1e-18
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    62   3e-12
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    49   8e-11
emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]    52   1e-10
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                 52   9e-10

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 73.2 bits (178), Expect(2) = 1e-18
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = -1

Query: 274  DPDIQQVTQKCQQHPGSQPGYTVRNGILYYKNRLVISRKSIWIPLLLQEFHTSATGGHSG 95
            D  +Q++    Q+   S+PGY ++ G+L Y+ RLV+S KS+ IP LL EFH++  GGHSG
Sbjct: 820  DSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSG 879

Query: 94   YYRT 83
            +YRT
Sbjct: 880  FYRT 883



 Score = 44.7 bits (104), Expect(2) = 1e-18
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = -3

Query: 83  FRRLTANLYWPGMSSTVQQFVQACDIC 3
           +RRL AN+YW GM +TVQ++V++CD C
Sbjct: 884 YRRLAANVYWVGMKNTVQEYVRSCDTC 910


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 61.6 bits (148), Expect(2) = 3e-12
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = -1

Query: 274  DPDIQQVTQKCQQHPGSQPGYTVRNGILYYKNRLVISRKSIWIPLLLQEFHTSATGGHSG 95
            DP + ++ Q+    P + P Y++ +GIL YK RLV+ + S  +P LLQE H S  GGHSG
Sbjct: 1676 DPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHASVVGGHSG 1735

Query: 94   YYRT 83
            +  T
Sbjct: 1736 FLXT 1739



 Score = 34.7 bits (78), Expect(2) = 3e-12
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 92   LSDFRRLTANLYWPGMSSTVQQFVQACDIC 3
            L  ++RLT + +W GM + +++FV+ C +C
Sbjct: 1737 LXTYKRLTRDFFWVGMKNDIKEFVEKCLVC 1766


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 48.5 bits (114), Expect(2) = 8e-11
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = -1

Query: 283  ARTDPDIQQVTQKCQQHPGSQPGYTVRNGILYYKNRLVISRKSIWIPLLLQEFHTSATGG 104
            A ++P +Q++ Q   + P  QP Y  RNG++ Y NR+V+   S  I  LL+EFH +  GG
Sbjct: 867  ANSNPYMQRIGQLATKQP-RQP-YQWRNGLVCYNNRIVVPPGSPLIHCLLREFHDTPMGG 924

Query: 103  HSGYYRT 83
            HS   RT
Sbjct: 925  HSRILRT 931



 Score = 42.7 bits (99), Expect(2) = 8e-11
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 98   RVLSDFRRLTANLYWPGMSSTVQQFVQACDIC 3
            R+L  ++RL+   YWP M  +V Q+V ACD+C
Sbjct: 927  RILRTYKRLSQQFYWPSMRRSVHQYVAACDVC 958


>emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]
          Length = 422

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 26/44 (59%), Positives = 30/44 (68%)
 Frame = -1

Query: 214 YTVRNGILYYKNRLVISRKSIWIPLLLQEFHTSATGGHSGYYRT 83
           YT RNG++ YKNR+VI   S  I  LL+EFH S  GGHSG  RT
Sbjct: 16  YTWRNGLVCYKNRVVIPLNSPIIKQLLREFHDSPIGGHSGVLRT 59



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 95  VLSDFRRLTANLYWPGMSSTVQQFVQACDIC 3
           VL  ++RL    YWP M   VQ +V +CD+C
Sbjct: 56  VLRTYKRLAQQFYWPSMFQIVQDYVSSCDVC 86


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score = 51.6 bits (122), Expect(2) = 9e-10
 Identities = 25/64 (39%), Positives = 39/64 (60%)
 Frame = -1

Query: 274  DPDIQQVTQKCQQHPGSQPGYTVRNGILYYKNRLVISRKSIWIPLLLQEFHTSATGGHSG 95
            D   ++V Q+      S  GY ++ G L YK+R+V+ + S  I  +L+EFH +A GGH+G
Sbjct: 1059 DERYRKVLQELATQGNSAVGYQLKRGRLLYKDRIVLPKGSTKILTVLKEFHDTALGGHAG 1118

Query: 94   YYRT 83
             +RT
Sbjct: 1119 IFRT 1122



 Score = 36.2 bits (82), Expect(2) = 9e-10
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 95   VLSDFRRLTANLYWPGMSSTVQQFVQACDIC 3
            +   ++R++A  YW GM   +Q +VQ C++C
Sbjct: 1119 IFRTYKRISALFYWEGMKLDIQNYVQKCEVC 1149


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