BLASTX nr result

ID: Atractylodes21_contig00043872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043872
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   136   2e-30
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   126   2e-27
emb|CAJ65868.1| putative integrase [Cucumis melo]                     123   1e-26
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   123   2e-26
emb|CAJ65875.1| putative integrase [Cucumis melo]                     123   2e-26

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -3

Query: 273  QACDICQRCKASTLAPGGLLQPPNIPEEIWEHVSMDFISRLPKSKGYDVILVVVDRLSKY 94
            ++CD CQR K    +PGGLLQP  +P+ IWE +SMDFI  LPKSKGY+ +LVVVDRLSKY
Sbjct: 905  RSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKY 964

Query: 93   SHFVLLRHPYTTKSVAELFVREVVRLHGIP 4
            SHF+LL+HPYT K +A++F+REVVRLHGIP
Sbjct: 965  SHFILLKHPYTAKVIADVFIREVVRLHGIP 994


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/90 (62%), Positives = 72/90 (80%)
 Frame = -3

Query: 273  QACDICQRCKASTLAPGGLLQPPNIPEEIWEHVSMDFISRLPKSKGYDVILVVVDRLSKY 94
            Q C ICQ+ K STL+P GLLQP  IP  IWE +SMDF+  LPKS+G+D ILVVVDRLSKY
Sbjct: 1146 QNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSKY 1205

Query: 93   SHFVLLRHPYTTKSVAELFVREVVRLHGIP 4
            +HF+ L+HP+T  +VA +F++E+V+LHG P
Sbjct: 1206 AHFITLKHPFTAPTVAAVFIKEIVKLHGFP 1235


>emb|CAJ65868.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/89 (61%), Positives = 70/89 (78%)
 Frame = -3

Query: 267 CDICQRCKASTLAPGGLLQPPNIPEEIWEHVSMDFISRLPKSKGYDVILVVVDRLSKYSH 88
           C +CQ+ K   L+P GLLQP +IP  IWE +SMDF+  LP+SKG+D ILVVVDRLSKY+H
Sbjct: 13  CHVCQQNKIQALSPAGLLQPLSIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAH 72

Query: 87  FVLLRHPYTTKSVAELFVREVVRLHGIPK 1
           F+ L HP++ K VA +FV+EVVRLHG P+
Sbjct: 73  FITLGHPFSAKVVALVFVKEVVRLHGYPR 101


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/90 (63%), Positives = 71/90 (78%)
 Frame = -3

Query: 273  QACDICQRCKASTLAPGGLLQPPNIPEEIWEHVSMDFISRLPKSKGYDVILVVVDRLSKY 94
            Q C +CQ+ K S+LAP GLLQP  IP  IWE VSMDF+  LPKS G+D ILVVVDRLSKY
Sbjct: 982  QECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSILVVVDRLSKY 1041

Query: 93   SHFVLLRHPYTTKSVAELFVREVVRLHGIP 4
             HF+ LRHP++  +VA++F++EVV+LHG P
Sbjct: 1042 GHFIGLRHPFSAATVAQVFIKEVVKLHGFP 1071


>emb|CAJ65875.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/89 (61%), Positives = 69/89 (77%)
 Frame = -3

Query: 267 CDICQRCKASTLAPGGLLQPPNIPEEIWEHVSMDFISRLPKSKGYDVILVVVDRLSKYSH 88
           C +CQ+ K   L+P GLLQP  IP  IWE +SMDF+  LP+SKG+D ILVVVDRLSKY+H
Sbjct: 13  CHVCQQTKIQALSPAGLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAH 72

Query: 87  FVLLRHPYTTKSVAELFVREVVRLHGIPK 1
           F+ L HP++ K VA +FV+EVVRLHG P+
Sbjct: 73  FITLGHPFSAKVVALVFVKEVVRLHGYPR 101


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