BLASTX nr result

ID: Atractylodes21_contig00043743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043743
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1...    72   2e-19
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1...    72   2e-19
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr...    71   3e-19
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1...    70   5e-19
emb|CBI23759.3| unnamed protein product [Vitis vinifera]               70   5e-19

>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 563

 Score = 72.4 bits (176), Expect(2) = 2e-19
 Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = -2

Query: 284 ECSSPFECCDIVMSTTHKSLL--EEVLVFYRKGRKPRQKGMPLSQGYGCDRYDFEER 120
           EC +PF+ CDIV STTHKSL      ++FYRKG KPR++G+ LSQG+  D+YDFEE+
Sbjct: 321 ECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGHESDQYDFEEK 377



 Score = 48.1 bits (113), Expect(2) = 2e-19
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = -1

Query: 123 KMNFAVSWALQGGSDNNYIVVLAITLKQLATPKYKS 16
           K+NFAV  ++QGG  NN+I  LAI LKQ+ATP+YK+
Sbjct: 377 KINFAVFPSMQGGPHNNHIAALAIALKQVATPEYKA 412


>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 566

 Score = 72.0 bits (175), Expect(2) = 2e-19
 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = -2

Query: 284 ECSSPFECCDIVMSTTHKSLL--EEVLVFYRKGRKPRQKGMPLSQGYGCDRYDFEER 120
           EC +PF+ CDIV STTHKSL      ++FYRKG KPR +G+ LSQG+  D+YDFEE+
Sbjct: 324 ECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRNRGILLSQGHESDQYDFEEK 380



 Score = 48.1 bits (113), Expect(2) = 2e-19
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = -1

Query: 123 KMNFAVSWALQGGSDNNYIVVLAITLKQLATPKYKS 16
           K+NFAV  ++QGG  NN+I  LAI LKQ+ATP+YK+
Sbjct: 380 KINFAVFPSMQGGPHNNHIAALAIALKQVATPEYKA 415


>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|355482048|gb|AES63251.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 593

 Score = 70.9 bits (172), Expect(2) = 3e-19
 Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = -2

Query: 284 ECSSPFECCDIVMSTTHKSLL--EEVLVFYRKGRKPRQKGMPLSQGYGCDRYDFEER 120
           EC +PF+ CD+V STTHKSL      ++FYRKG KPR++G+ L+QG+  D+YDFEE+
Sbjct: 351 ECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEK 407



 Score = 48.9 bits (115), Expect(2) = 3e-19
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -1

Query: 123 KMNFAVSWALQGGSDNNYIVVLAITLKQLATPKYKS 16
           K+NFAV  +LQGG  NN+I  LAI LKQ+ATP+YK+
Sbjct: 407 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKA 442


>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 577

 Score = 70.1 bits (170), Expect(2) = 5e-19
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 284 ECSSPFECCDIVMSTTHKSLL--EEVLVFYRKGRKPRQKGMPLSQGYGCDRYDFEER 120
           EC +PF+ CDIV STTHKSL      ++FYRKG KPR++GM LSQG   D YD+EE+
Sbjct: 335 ECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEEK 391



 Score = 48.9 bits (115), Expect(2) = 5e-19
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -1

Query: 123 KMNFAVSWALQGGSDNNYIVVLAITLKQLATPKYKS 16
           K+NFAV  +LQGG  NN+I  LAI LKQ+ATP+YK+
Sbjct: 391 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKA 426


>emb|CBI23759.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score = 70.1 bits (170), Expect(2) = 5e-19
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -2

Query: 284 ECSSPFECCDIVMSTTHKSLL--EEVLVFYRKGRKPRQKGMPLSQGYGCDRYDFEER 120
           EC +PF+ CDIV STTHKSL      ++FYRKG KPR++GM LSQG   D YD+EE+
Sbjct: 103 ECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEEK 159



 Score = 48.9 bits (115), Expect(2) = 5e-19
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -1

Query: 123 KMNFAVSWALQGGSDNNYIVVLAITLKQLATPKYKS 16
           K+NFAV  +LQGG  NN+I  LAI LKQ+ATP+YK+
Sbjct: 159 KINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKA 194


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