BLASTX nr result

ID: Atractylodes21_contig00043669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043669
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   140   8e-32
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   132   2e-29
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   128   5e-28
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   107   1e-21
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   105   4e-21

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/103 (62%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 WRFRKLDMPLFDGTNPDGWILRAERYFVFYRLGEEDK-EADVVSLEGDALLWFQWEDRRH 130
           WR +KLD+P+F G NPDGWI+RAER+F FYRL E++K EA VVSL+G+ALLW+QWE+RR 
Sbjct: 97  WRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWENRRR 156

Query: 129 PIKRWEELKMLVLRRFRSTQFGSLHEQ*LSITQTESVADYQRR 1
           PI RW E++ ++LRRFR T  GSL EQ LS  Q E V +Y+R+
Sbjct: 157 PIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRK 199


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 WRFRKLDMPLFDGTNPDGWILRAERYFVFYRLGEEDK-EADVVSLEGDALLWFQWEDRRH 130
           WR +KLDMP FD T+PDGWILR ER+F FY L + +K EA VV++EGDAL W+QWE++R 
Sbjct: 172 WRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRR 231

Query: 129 PIKRWEELKMLVLRRFRSTQFGSLHEQ*LSITQTESVADYQRR 1
           P + WE +K  VL +FR    GSLHEQ LS TQT SV +Y+R+
Sbjct: 232 PFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRK 274


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 WRFRKLDMPLFDGTNPDGWILRAERYFVFYRLG-EEDKEADVVSLEGDALLWFQWEDRRH 130
           W+ ++LD+P+F GTNPDGWILR ERYF FYRL  EE  EA VV+L+G+ALLWFQWE R  
Sbjct: 77  WKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHR 136

Query: 129 PIKRWEELKMLVLRRFRSTQFGSLHEQ*LSITQTESVADYQRR 1
           PI  W E+K ++LR+FR T  GSL EQ ++  Q  SV +Y+ R
Sbjct: 137 PITGWPEMKAMLLRQFRDTALGSLQEQWMNHHQEGSVKEYKSR 179


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/103 (54%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -3

Query: 306  WR-FRKLDMPLFDGTNPDGWILRAERYFVFYRLGEEDK-EADVVSLEGDALLWFQWEDRR 133
            WR  R+++MP+F G NPDGWI RA+RYF  Y L EE+K  A  +SL+GDAL W+QW D R
Sbjct: 767  WRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSR 826

Query: 132  HPIKRWEELKMLVLRRFRSTQFGSLHEQ*LSITQTESVADYQR 4
                 WE LK  +L RFR TQ GSL EQ L++ Q  +VA Y R
Sbjct: 827  EVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWR 869


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 RKLDMPLFDGTNPDGWILRAERYFVFYRLGEEDK-EADVVSLEGDALLWFQWEDRRHPIK 121
           RKL +P+F+G NPDGWI RAERYF    +   D+ +A  V LEGDAL WFQWE+ R P +
Sbjct: 106 RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFR 165

Query: 120 RWEELKMLVLRRFRSTQFGSLHEQ*LSITQTESVADYQRR 1
            W + K  ++  FRSTQ G+LH+Q L++ QT +V +++R+
Sbjct: 166 SWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQ 205


Top