BLASTX nr result

ID: Atractylodes21_contig00043660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043660
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   152   2e-35
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
emb|CBI35789.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34

>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/113 (65%), Positives = 92/113 (81%)
 Frame = +1

Query: 7   PSLVSYNSIVHGLAKNGGYLRAYQLLEQGIEIGYSPSEYTYKVLIECLCFEEYDLSKAKK 186
           PSLVSYNSI+HGL K  G +RAYQL E+GIE GY PSEYTYKVL+E LC +E DL KA++
Sbjct: 344 PSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALC-QEMDLDKARR 402

Query: 187 LLDIMLNKEGVDKARIYNIYLGALCRMNKDASTEILNTLVIMLETKCHPDVVT 345
           +++ MLNK+GVD+ RIYNIYL ALC  N  ++TE+LN LV ML+T+C PDV+T
Sbjct: 403 IVEAMLNKDGVDRTRIYNIYLRALCLTN--SATELLNVLVSMLQTECQPDVIT 453


>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 681

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/113 (64%), Positives = 92/113 (81%)
 Frame = +1

Query: 7   PSLVSYNSIVHGLAKNGGYLRAYQLLEQGIEIGYSPSEYTYKVLIECLCFEEYDLSKAKK 186
           P L+SYNSI+HGL+K GG +RAYQLL +G+E GYSPSE+TYKVL+E LC +E D  KAK+
Sbjct: 339 PGLLSYNSIIHGLSKEGGCMRAYQLLVEGVEFGYSPSEHTYKVLLEGLC-KELDTQKAKE 397

Query: 187 LLDIMLNKEGVDKARIYNIYLGALCRMNKDASTEILNTLVIMLETKCHPDVVT 345
           +L IM++K+GVD+ RIYNIYL A+C  N   STE+LNTLV ML+T C PDV+T
Sbjct: 398 VLQIMIHKQGVDRTRIYNIYLRAVCLTNN--STELLNTLVEMLQTNCQPDVIT 448


>ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 646

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/113 (64%), Positives = 92/113 (81%)
 Frame = +1

Query: 7   PSLVSYNSIVHGLAKNGGYLRAYQLLEQGIEIGYSPSEYTYKVLIECLCFEEYDLSKAKK 186
           P L+SYNSI+HGL+K GG +RAYQLL +G+E GYSPSE+TYKVL+E LC +E D  KAK+
Sbjct: 306 PGLLSYNSIIHGLSKEGGCMRAYQLLVEGVEFGYSPSEHTYKVLLEGLC-KELDTQKAKE 364

Query: 187 LLDIMLNKEGVDKARIYNIYLGALCRMNKDASTEILNTLVIMLETKCHPDVVT 345
           +L IM++K+GVD+ RIYNIYL A+C  N   STE+LNTLV ML+T C PDV+T
Sbjct: 365 VLQIMIHKQGVDRTRIYNIYLRAVCLTNN--STELLNTLVEMLQTNCQPDVIT 415


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/113 (64%), Positives = 91/113 (80%)
 Frame = +1

Query: 7   PSLVSYNSIVHGLAKNGGYLRAYQLLEQGIEIGYSPSEYTYKVLIECLCFEEYDLSKAKK 186
           PSLVSYN IVHGL+K GG +RAYQLL++G+E GY  SE+TYKVL+E LC  + DL KA++
Sbjct: 578 PSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALC-RDADLCKARE 636

Query: 187 LLDIMLNKEGVDKARIYNIYLGALCRMNKDASTEILNTLVIMLETKCHPDVVT 345
           ++ +MLNKEGVD+ RIYNIYL ALC MN    TE+LN LV ML+T+C PDV+T
Sbjct: 637 VMQLMLNKEGVDQTRIYNIYLRALCLMNN--PTELLNVLVFMLQTQCQPDVIT 687


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/113 (64%), Positives = 91/113 (80%)
 Frame = +1

Query: 7   PSLVSYNSIVHGLAKNGGYLRAYQLLEQGIEIGYSPSEYTYKVLIECLCFEEYDLSKAKK 186
           PSLVSYN IVHGL+K GG +RAYQLL++G+E GY  SE+TYKVL+E LC  + DL KA++
Sbjct: 346 PSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALC-RDADLCKARE 404

Query: 187 LLDIMLNKEGVDKARIYNIYLGALCRMNKDASTEILNTLVIMLETKCHPDVVT 345
           ++ +MLNKEGVD+ RIYNIYL ALC MN    TE+LN LV ML+T+C PDV+T
Sbjct: 405 VMQLMLNKEGVDQTRIYNIYLRALCLMNN--PTELLNVLVFMLQTQCQPDVIT 455


Top