BLASTX nr result

ID: Atractylodes21_contig00043649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043649
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   317   2e-84
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              317   2e-84
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   315   5e-84
ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   309   3e-82
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi...   308   5e-82

>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  317 bits (811), Expect = 2e-84
 Identities = 149/221 (67%), Positives = 185/221 (83%)
 Frame = -3

Query: 663 FNNAWCLIRDLYQSSMDTQRPMLIMIDRYAAANEPAEAIRTFQIMEKFKLSPDQKAFYTL 484
           F  AWCLIR+L++SS+DT+R MLIMIDRY AAN+P +AI+TF IMEKF+LSPDQ+AFYTL
Sbjct: 159 FGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQEAFYTL 218

Query: 483 LYTLCKHGNVEEAEEFMFLNAKLFPLETEGFNLILGGWCNVFVDIFEAKRVWKEMDKCRV 304
           L  LCKHGNVE+AEE MF N KLFPLETEGFN+IL GW NV +DIFEAKR+W+EM KC +
Sbjct: 219 LTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVSLDIFEAKRIWREMSKCCI 278

Query: 303 IPDEISYTHMISCFSKVNNLFESLRLYDEMKKKGCTPNQWVYNSLVYVLAHENCHDEALR 124
           +P+  +YT MISCFSK  NLF+SLRL+D+MKK+G  P   VYNSL+YVL HENC  EAL+
Sbjct: 279 VPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALK 338

Query: 123 ILHKMKEVGLKPDSSFYNSLIRPLCEAGKPEDARSVLSRML 1
           IL K+KE+GL+ DS+ YN +IRPLC+A K E+AR++L+ M+
Sbjct: 339 ILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMI 379


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  317 bits (811), Expect = 2e-84
 Identities = 149/221 (67%), Positives = 185/221 (83%)
 Frame = -3

Query: 663 FNNAWCLIRDLYQSSMDTQRPMLIMIDRYAAANEPAEAIRTFQIMEKFKLSPDQKAFYTL 484
           F  AWCLIR+L++SS+DT+R MLIMIDRY AAN+P +AI+TF IMEKF+LSPDQ+AFYTL
Sbjct: 159 FGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQEAFYTL 218

Query: 483 LYTLCKHGNVEEAEEFMFLNAKLFPLETEGFNLILGGWCNVFVDIFEAKRVWKEMDKCRV 304
           L  LCKHGNVE+AEE MF N KLFPLETEGFN+IL GW NV +DIFEAKR+W+EM KC +
Sbjct: 219 LTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVSLDIFEAKRIWREMSKCCI 278

Query: 303 IPDEISYTHMISCFSKVNNLFESLRLYDEMKKKGCTPNQWVYNSLVYVLAHENCHDEALR 124
           +P+  +YT MISCFSK  NLF+SLRL+D+MKK+G  P   VYNSL+YVL HENC  EAL+
Sbjct: 279 VPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALK 338

Query: 123 ILHKMKEVGLKPDSSFYNSLIRPLCEAGKPEDARSVLSRML 1
           IL K+KE+GL+ DS+ YN +IRPLC+A K E+AR++L+ M+
Sbjct: 339 ILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMI 379


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  315 bits (807), Expect = 5e-84
 Identities = 148/221 (66%), Positives = 180/221 (81%)
 Frame = -3

Query: 663 FNNAWCLIRDLYQSSMDTQRPMLIMIDRYAAANEPAEAIRTFQIMEKFKLSPDQKAFYTL 484
           FNNAW +IRD++Q SM+ Q+ MLIMIDRYAAA+ P +AI  F IMEKFK++PD++AFY+L
Sbjct: 171 FNNAWIVIRDMHQLSMNIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAFYSL 230

Query: 483 LYTLCKHGNVEEAEEFMFLNAKLFPLETEGFNLILGGWCNVFVDIFEAKRVWKEMDKCRV 304
           +  LC HG +EEAEEFM +N KLFPLETEGFN+IL GWC++ V++ EAKRVW+EM KC +
Sbjct: 231 MNALCNHGYIEEAEEFMVVNKKLFPLETEGFNVILNGWCSICVNLLEAKRVWREMSKCCI 290

Query: 303 IPDEISYTHMISCFSKVNNLFESLRLYDEMKKKGCTPNQWVYNSLVYVLAHENCHDEALR 124
            P+  SYTHMISCFSKV NLF+SLRLYDEMKK+G  P   VYNSL+YVL  ENC  EALR
Sbjct: 291 TPNATSYTHMISCFSKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALR 350

Query: 123 ILHKMKEVGLKPDSSFYNSLIRPLCEAGKPEDARSVLSRML 1
            L KMKEVGL+PDS+ YNS+IRPLCE  K  +ARSVL+ M+
Sbjct: 351 FLDKMKEVGLQPDSTTYNSMIRPLCEGKKLVEARSVLATMI 391


>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  309 bits (792), Expect = 3e-82
 Identities = 146/221 (66%), Positives = 179/221 (80%)
 Frame = -3

Query: 663 FNNAWCLIRDLYQSSMDTQRPMLIMIDRYAAANEPAEAIRTFQIMEKFKLSPDQKAFYTL 484
           FN AW LIRDL++S M T++ MLIMIDRYAAAN P +AI  F+IM+KF+++PD++AFY L
Sbjct: 72  FNTAWILIRDLHRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMTPDEEAFYFL 131

Query: 483 LYTLCKHGNVEEAEEFMFLNAKLFPLETEGFNLILGGWCNVFVDIFEAKRVWKEMDKCRV 304
           L  LCK+GN+EEAEEFM +N K FPLE EGFN+IL GWCN+ VD+FEAKR+W+EM K  +
Sbjct: 132 LNVLCKNGNIEEAEEFMLVNKKFFPLEVEGFNIILNGWCNICVDVFEAKRIWREMSKYCI 191

Query: 303 IPDEISYTHMISCFSKVNNLFESLRLYDEMKKKGCTPNQWVYNSLVYVLAHENCHDEALR 124
            PD  +YTHMISCFSKV NLF+SLRLYD MKK+G  P   VYNSLVY+L  ENC  EAL+
Sbjct: 192 DPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEALK 251

Query: 123 ILHKMKEVGLKPDSSFYNSLIRPLCEAGKPEDARSVLSRML 1
           IL KMKE GL+ DS+ YNS+IRPLCEA K EDARS+++ M+
Sbjct: 252 ILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMI 292


>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
           gi|449509164|ref|XP_004163514.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
          Length = 547

 Score =  308 bits (790), Expect = 5e-82
 Identities = 143/220 (65%), Positives = 182/220 (82%)
 Frame = -3

Query: 663 FNNAWCLIRDLYQSSMDTQRPMLIMIDRYAAANEPAEAIRTFQIMEKFKLSPDQKAFYTL 484
           F+ AW LIR+L+ S +++ + ML+MIDRYA ANE ++AI+TF +MEKF+L+PDQ+AF+ L
Sbjct: 163 FSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVL 222

Query: 483 LYTLCKHGNVEEAEEFMFLNAKLFPLETEGFNLILGGWCNVFVDIFEAKRVWKEMDKCRV 304
           L +LCK+GN+EEAEEFMF+N KLFPL TE FN+IL GWCNV VD+FEAKR+W+EM KC +
Sbjct: 223 LNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSKCCI 282

Query: 303 IPDEISYTHMISCFSKVNNLFESLRLYDEMKKKGCTPNQWVYNSLVYVLAHENCHDEALR 124
           +PD  SYTHMISCFSK  NLF+SLR YD+MKK+   P+  VYNSL YVL  ENC +EAL+
Sbjct: 283 LPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALK 342

Query: 123 ILHKMKEVGLKPDSSFYNSLIRPLCEAGKPEDARSVLSRM 4
           IL K+KEVGL+PDS+ YNSLI PLCEAGK ++A+ VL+ M
Sbjct: 343 ILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMM 382


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