BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043640
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...   182   4e-44
ref|XP_002532388.1| pentatricopeptide repeat-containing protein,...   181   9e-44
ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-43
ref|XP_003613018.1| Pentatricopeptide repeat-containing protein ...   174   8e-42

>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Cucumis sativus] gi|449522905|ref|XP_004168466.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  184 bits (467), Expect = 1e-44
 Identities = 85/173 (49%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
 Frame = -2

Query: 605  WKLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNE 426
            W+ +D +  ++LF +M E GC PN NT+   I GLC+ G LE A RL  HM     +PNE
Sbjct: 734  WRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNE 793

Query: 425  HIYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCS 246
             IY +L+ CSC L ++ +A+  ++IM+E+R L HL+S KLL+CGLYD+   EKAK +FCS
Sbjct: 794  DIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCS 853

Query: 245  LLD-RYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
             L   YN DE+ WK+L+DGLLK+GL D+CS+L  +ME +GC ++P TY +L +
Sbjct: 854  FLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
 Frame = -2

Query: 593 DLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYT 414
           ++D A  +F  M  +GC  N  ++  LI G C   R++EA +L   M      P    YT
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYT 313

Query: 413 ALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR 234
            ++   C L    +AL +   M E     ++ +Y +LIC L +    + AK+I   +L++
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 233 -YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY--LILADHMGVSI 72
              P  V +  L+DG  K+GL     E++ +ME   C  N  TY  LIL    G +I
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNI 430



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
 Frame = -2

Query: 584 TAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTALV 405
           +A+E+ S M    C PN  T+  LI G CR   + +A  L+H ML  +L PN   Y  L+
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 404 NCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR-YN 228
           +  C       A  L+++M ES ++    +Y + I  L  +   E+A+ +F SL ++   
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516

Query: 227 PDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
            +EV +  L+DG  K G V     L+D M   GC  N  TY  L D
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
 Frame = -2

Query: 593 DLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYT 414
           + D A ++ + MLE+G  P+V T+ ALI G C+ G    A  ++  M +   +PN   Y 
Sbjct: 359 NFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYN 418

Query: 413 ALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR 234
            L+   C  +   KA++L++ M+E ++  ++ +Y +LI G   +     A ++  SL++ 
Sbjct: 419 ELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL-SLMNE 477

Query: 233 YN--PDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
               PDE  + + +D L KRGLV+    L + +++KG   N   Y  L D
Sbjct: 478 SGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D A++LFS+M E  C P V T+  +I  LC+ GR  EA  +   M      PN H YT 
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDRY 231
           L+   C    FD A  ++N M+E  ++  + +Y  LI G   K     A EI  SL++  
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL-SLMESN 408

Query: 230 N--PDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHMGVSIG*GQD 57
           N  P+   +  L+ G  +   + +   L+  M ++    N  TY IL          G  
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 56  F*KLVYTHPNKIVPLSW 6
           +  L   + + +VP  W
Sbjct: 469 YKLLSLMNESGLVPDEW 485



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
 Frame = -2

Query: 593 DLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYT 414
           ++  AM L  +MLER  +PNV T+  LI G C++G L  A +L+  M    L P+E  Y+
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYS 488

Query: 413 ALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR 234
             ++  C   + ++A +L   + E  I  +   Y  LI G     K    + +   +L  
Sbjct: 489 VFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSA 548

Query: 233 -YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
              P+ + +  L+DG  K         L+D+M K+       TY IL D++
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
 Frame = -2

Query: 590  LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
            ++ A  LF  + E+G K N   +  LI G C+ G++ +   L+  ML+    PN   Y +
Sbjct: 500  VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 410  LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR- 234
            L++  C  + F +A  LV+IM++  I    ++Y +LI  L    + ++A ++F  +L   
Sbjct: 560  LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 233  YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHMG 81
             +PD   +   +      G +     LI  M  KG   +   Y +  D  G
Sbjct: 620  SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYG 670



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           + + +D    ++ EML+    PN+ T   ++ G C+ G + EA   V  ++   L+ +  
Sbjct: 181 RFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTF 240

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
            YT+L+   C  +  D A  +   M     L +  SY  LI G  + R+ ++A ++F  +
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300

Query: 242 -LDRYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLIL 96
             D   P    + +++  L + G       +   M +K C  N HTY +L
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350


>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
            [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
            protein product [Vitis vinifera]
          Length = 890

 Score =  182 bits (462), Expect = 4e-44
 Identities = 91/170 (53%), Positives = 125/170 (73%), Gaps = 1/170 (0%)
 Frame = -2

Query: 596  MDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIY 417
            ++ + A++LF +M+E GC  +V+ + ALIAG C+  RLEEA  LVHHM    ++P+E IY
Sbjct: 716  LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 775

Query: 416  TALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLD 237
             +L++C C L ++ +A+ LV+ MVE+ +L  LESYKLL+CGLY +  +EKAK +F  LL 
Sbjct: 776  NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 835

Query: 236  -RYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
              YN DEVAWK+L+DGLLKR LVD CSELID+ME+KGC  NP TY +L +
Sbjct: 836  CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = -2

Query: 581 AMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTALVN 402
           A+ LF+EM E+GC+PNV+T+  LI GLC++ +++EA +++  M    L P+   Y AL++
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 401 CSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR-YNP 225
             C   M D A  ++++M  +    +  +Y  LICGL  KRK  KA  +   +L+R  +P
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 224 DEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
             + +  L+ G  K   ++    L+ +M + G   +  TY +  D
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D A ++ SEM E+G  P+V T+ ALI G C++G +++A  ++  M +    PN   Y  
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDRY 231
           L+   C  R   KA+ L+N M+E ++   L +Y  LI G       E A  +  SL++  
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL-SLMNEN 468

Query: 230 N--PDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
              PD+  + + +D L K G V+    L D ++ KG   N   Y  L D
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           K+ DL++A  L S M E G  P+  T+   I  LC++GR+EEA  L   +    +  NE 
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
           IYTAL++  C +   D A +L+  M+    L +  +Y +LI GL  ++K ++A  +   +
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 242 LDR-YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY 105
           L     P  V + IL+  +LK G  D   ++ + M   G   +  TY
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = -2

Query: 602  KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
            K+  +D A  L   ML   C PN  T+  LI GLC++ +++EA  LV  MLT  + P   
Sbjct: 521  KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580

Query: 422  IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
             YT L+        FD AL + N MV       + +Y   +   + +   E+  ++   +
Sbjct: 581  TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640

Query: 242  LDR-YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLI 99
             +    PD V + +L+DG  + GL  R  + +  M   GC   P  Y++
Sbjct: 641  NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC--KPSLYIV 687



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/162 (27%), Positives = 68/162 (41%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           ++ A++LF++M E  C P V T+  LI  L   GR  EA  L + M      PN H YT 
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDRY 231
           L++  C     D+A  +++ M E  ++                                 
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLI--------------------------------- 366

Query: 230 NPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY 105
            P  V +  L+DG  K G++D   E++D+ME   C  N  TY
Sbjct: 367 -PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           K + +D    ++ E+L     PN+ TF A++ G C+ G + EA      ++   L P+  
Sbjct: 171 KFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTF 230

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
            YT+L+   C  +  D A  +  IM +     +  SY  LI GL +  +  +A ++F  +
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290

Query: 242 L-DRYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
             D   P    + +L+  L   G       L + M++KGC  N HTY +L D
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342


>ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527912|gb|EEF30000.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 676

 Score =  181 bits (459), Expect = 9e-44
 Identities = 90/173 (52%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
 Frame = -2

Query: 605  WKLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNE 426
            WK+M  +TA+ELF +MLE GC PN+NT+  LI GLC+ GRL  A +L  HM    ++P+E
Sbjct: 499  WKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSE 558

Query: 425  HIYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCS 246
             IY +L+NC C L ++  A+ LV  M+E   L  LES  +L CGLY++   EKAK +F +
Sbjct: 559  AIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSN 618

Query: 245  LLD-RYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
            LL   YN DEVAWKIL+DGLLK GL D CSEL+ VME +GC ++P TY +L +
Sbjct: 619  LLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
 Frame = -2

Query: 581 AMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTALVN 402
           A+ LFSEM ERGC+PN++T+  +I  +C++ +LEE  R++  M+   L P+   Y AL++
Sbjct: 93  AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALID 152

Query: 401 CSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLD-RYNP 225
             C   M + A  ++++M  +    +  +Y  LICG   K+   +A  +   +L+ R  P
Sbjct: 153 GYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTP 212

Query: 224 DEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
             V +  L+ G  K G +D    L+++M + G   +  TY +  D
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           ++ A E+   M    C PN  T+  LI G CR   +  A  L+  ML   L P+   Y +
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR- 234
           L++  C +   D A  L+N+M E+ ++    +Y + I  L  K + E+A  +F SL ++ 
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
              +EV +  L+DG  K G +D  + L+D M  + C  N  TY  L D
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALID 327



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           ++ A  LF+ + E+G K N   + ALI G C+ G++++A  L+  MLT +  PN   Y A
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR- 234
           L++  C  R   +AL L+  M++  +   + +Y +LI  +  +   + A  I   ++   
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHMG 81
           Y PD   +   +     RG +    +++ +M ++G   +  TY ++ D  G
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           L+    +  EM+E+G  P+V T+ ALI G C++G +E A  ++  M +    PNE  Y  
Sbjct: 125 LEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDRY 231
           L+   C  +   +A+ L++ M+ESR+   + +Y  LI G       + A  +  +L++  
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL-NLMNEN 243

Query: 230 N--PDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
              PD+  + + +D L K+G ++  + L + +++KG   N   Y  L D
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALID 292



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
 Frame = -2

Query: 593 DLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYT 414
           D+++A  +F+ M ++GC+ N  ++  LI GLC  GR++E   +   M   +  P    YT
Sbjct: 19  DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78

Query: 413 ALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR 234
            +V+         +A+ L + M E     ++ +Y ++I  +  + K E+ + I   ++++
Sbjct: 79  VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138

Query: 233 -YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY 105
              P    +  L+DG  K G+V+   E++D+M    C+ N  TY
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTY 182



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           K+  LD+A  L + M E G  P+  T+   I  LC+ GR+EEA  L + +    +  NE 
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
           IYTAL++  C     D A +L++ M+    L +  +Y  LI GL  +RK ++A  +  S+
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 242 LDRYNPDEV-AWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILA 93
           + +     V  + IL+  +LK G  D    ++D M   G    P  Y+  A
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG--YQPDVYIYTA 394



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D A  L   ML   C PN +T+ ALI GLC++ +++EA  L+  M+   L      YT 
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR- 234
           L+        FD A  +++ MV S     +  Y   I     +   ++A+++   + +R 
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
             PD + + +++D     GL++   +++  M   GC  + HTY  L  H+
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469


>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Glycine max]
          Length = 892

 Score =  181 bits (458), Expect = 1e-43
 Identities = 89/175 (50%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
 Frame = -2

Query: 605  WKLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNE 426
            W  +D      LF +M E GC PN+NT+  LI GLC+ GRL  A  L HHM    ++P+E
Sbjct: 715  WSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE 774

Query: 425  HIYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCS 246
             I+ +L++  C L MF +A+TL++ M+E   L HLESYKLLICGL+++   EKA+ +FCS
Sbjct: 775  IIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCS 834

Query: 245  LLD-RYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
            LL   YN DEVAWK+L+DGL K G VD+CSEL+++MEK GC L+P TY +L   +
Sbjct: 835  LLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/152 (32%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
 Frame = -2

Query: 581 AMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTALVN 402
           A+ LF EM ERGC+PNV T+  LI  LC++GR++EA ++++ M+   +AP+   + AL+ 
Sbjct: 309 ALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIG 368

Query: 401 CSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLD-RYNP 225
             C   M + A+ ++ +M   ++  ++ +Y  LICG    +  ++A  +   +++ + +P
Sbjct: 369 SYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSP 428

Query: 224 DEVAWKILLDGLLKRGLVDRCSELIDVMEKKG 129
           D V +  L+ GL + G+VD  S L  +M + G
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D A+++ +EM+E+G  P+V  F ALI   C+ G +E+A  ++  M + ++ PN   Y  
Sbjct: 341 MDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNE 400

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLL-DR 234
           L+   C  +  D+A+ L+N MVES++   + +Y  LI GL +    + A  +F  ++ D 
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
           ++PD+  +   +  L + G V    ++++ +++K    N H Y  L D
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D AM L ++M+E    P+V T+  LI GLC  G ++ A RL   M+    +P++  + A
Sbjct: 411 MDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNA 470

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLL-DR 234
            + C C +    +A  ++  + E  +  +  +Y  LI G     K E A  +F  +L + 
Sbjct: 471 FMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE 530

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
             P+ + + +++DGL K G V     L++ M K       HTY IL + +
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           KL ++  A   F  +L     P++ T+ +L+ G CR+  +E AC +   M       N  
Sbjct: 201 KLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAV 256

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
            YT L++  C      +AL     M E      + +Y +L+C L +  +  +A  +F  +
Sbjct: 257 SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316

Query: 242 LDR-YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKG 129
            +R   P+   + +L+D L K G +D   ++++ M +KG
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG 355


>ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355514353|gb|AES95976.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  174 bits (442), Expect = 8e-42
 Identities = 85/175 (48%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
 Frame = -2

Query: 605  WKLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNE 426
            WK+ D +    LF +M+E+GC PNVNT+  LI GLC+   L  A RL +HM    ++P+E
Sbjct: 717  WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776

Query: 425  HIYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCS 246
            +I+ +L++  C L M ++AL L++ M+E   L HLESYKLL+CGL+++   EKA+EIF S
Sbjct: 777  NIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRS 836

Query: 245  LLD-RYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
            LL   YN DEV WK+LLDGL+++G VD CS+L D+MEK GC L+  T+ +L+  +
Sbjct: 837  LLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           K+  +D  ME+ S MLE+G   +V  F ALI G C+ G +E+A  ++  M   ++ PN  
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSR 401

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
            Y  L+   C  +  D+A+ L+N M E+++  +L +Y  LI GL   R  + A  +   +
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461

Query: 242 L-DRYNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILAD 90
           + D + PD+  +   +D L K G V++  ++ + +++K    N   Y  L D
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID 513



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D AM L ++M E    PN+ T+  LI GLC+   ++ A RL H M+     P++  + A
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLL-DR 234
            ++C C +   ++A  +   + E     +   Y  LI G     K   A  +F  +L + 
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
             P+ + + +LLDGL K G V+    L+DVM K       HTY IL + +
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEI 585



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
 Frame = -2

Query: 590 LDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTA 411
           +D A+ELF +M E GC P+V T+  L+A  C  G+  EA +    M+   + PN + YT 
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 410 LVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL-LDR 234
           L++  C +   D+ + +++ M+E  ++  +  +  LI G   +   E A  +  S+ L++
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 233 YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY 105
             P+   +  L+ G  ++  +DR   L++ M +     N  TY
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTY 438



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
 Frame = -2

Query: 602 KLMDLDTAMELFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEH 423
           K+ +L  A ++F  M + GC  N  ++  LI G C  G+++EA  L   M      P+  
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296

Query: 422 IYTALVNCSCYLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSL 243
            YT LV   C +    +AL     MVE+ I  ++ +Y +LI       K ++  E+  ++
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 242 LDR-YNPDEVAWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTY 105
           L++      V +  L+DG  KRG+++    ++D M+      N  TY
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = -2

Query: 572  LFSEMLERGCKPNVNTFEALIAGLCRDGRLEEACRLVHHMLTYELAPNEHIYTALVNCSC 393
            LF  ML  GC PN  TF  L+ GL ++G++E+A  LV  M  ++  P  H YT L+    
Sbjct: 527  LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEIL 586

Query: 392  YLRMFDKALTLVNIMVESRILLHLESYKLLICGLYDKRKHEKAKEIFCSLLDR-YNPDEV 216
                FD+A   ++ M+ S    ++ +Y   I     + +  +A+E+   + +     D  
Sbjct: 587  RESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSF 646

Query: 215  AWKILLDGLLKRGLVDRCSELIDVMEKKGCHLNPHTYLILADHM 84
             + +L++     G +D    ++  M   GC  +  TY IL  H+
Sbjct: 647  IYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL 690