BLASTX nr result

ID: Atractylodes21_contig00043561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043561
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306436.1| glutamate-gated kainate-type ion channel rec...   118   6e-25
gb|ABO28526.1| glutamate receptor [Malus hupehensis]                  115   3e-24
ref|XP_003629105.1| Glutamate receptor 3.6 [Medicago truncatula]...   114   8e-24
ref|XP_003608144.1| Glutamate receptor 3.3 [Medicago truncatula]...   114   8e-24
dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]         113   1e-23

>ref|XP_002306436.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222855885|gb|EEE93432.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 937

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/74 (70%), Positives = 66/74 (89%)
 Frame = -3

Query: 231  DISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACFLAL 52
            D+STAILKLSENG+LQRIHDKWL+R ACSSQGAKF VDRL+L+SF GL+ ICG+AC LAL
Sbjct: 790  DLSTAILKLSENGDLQRIHDKWLMRSACSSQGAKFEVDRLDLRSFWGLYLICGIACLLAL 849

Query: 51   FIYLVLIIHQYTKH 10
            F+Y + ++ Q+++H
Sbjct: 850  FLYFLKMVRQFSRH 863


>gb|ABO28526.1| glutamate receptor [Malus hupehensis]
          Length = 946

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/77 (67%), Positives = 65/77 (84%)
 Frame = -3

Query: 231  DISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACFLAL 52
            D+STA+LKLSENG+LQRIHDKWL+R  C+SQGAK  VDRL+L+SF GLF ICG ACFLAL
Sbjct: 797  DLSTALLKLSENGDLQRIHDKWLMRTPCASQGAKLQVDRLQLRSFWGLFVICGAACFLAL 856

Query: 51   FIYLVLIIHQYTKHKPD 1
             IY  +++HQ++KH  +
Sbjct: 857  AIYFCMMLHQFSKHNTE 873


>ref|XP_003629105.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355523127|gb|AET03581.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 739

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = -3

Query: 231 DISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACFLAL 52
           D+STAIL+L+E+G+LQRIHDKWL+  AC SQGAK  VDRL L+SF GL+ +CGLACFLAL
Sbjct: 589 DLSTAILELAESGDLQRIHDKWLLSSACRSQGAKLEVDRLNLRSFWGLYLVCGLACFLAL 648

Query: 51  FIYLVLIIHQYTKHKPD 1
            IY +  + QY KH PD
Sbjct: 649 LIYFIQTLRQYKKHSPD 665


>ref|XP_003608144.1| Glutamate receptor 3.3 [Medicago truncatula]
           gi|355509199|gb|AES90341.1| Glutamate receptor 3.3
           [Medicago truncatula]
          Length = 473

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = -3

Query: 231 DISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACFLAL 52
           D+STAIL+L+E+G+LQRIHDKWL+  AC SQGAK  VDRL L+SF GL+ +CGLACFLAL
Sbjct: 323 DLSTAILELAESGDLQRIHDKWLLSSACRSQGAKLEVDRLNLRSFWGLYLVCGLACFLAL 382

Query: 51  FIYLVLIIHQYTKHKPD 1
            IY +  + QY KH PD
Sbjct: 383 LIYFIQTLRQYKKHSPD 399


>dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]
          Length = 958

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/77 (70%), Positives = 63/77 (81%)
 Frame = -3

Query: 231  DISTAILKLSENGELQRIHDKWLIRGACSSQGAKFAVDRLELKSFKGLFFICGLACFLAL 52
            D+STAILKLSENGELQRIHDKWL   AC+SQ  K  VDRL+LKSF GLFF+CGLACFLAL
Sbjct: 810  DMSTAILKLSENGELQRIHDKWLSGIACTSQSTKLEVDRLQLKSFSGLFFLCGLACFLAL 869

Query: 51   FIYLVLIIHQYTKHKPD 1
             IY V++  QY ++ P+
Sbjct: 870  LIYFVMLACQYCQYYPN 886


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