BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043557
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    83   2e-14
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...    80   2e-13
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...    77   1e-12
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...    74   1e-11
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    71   8e-11

>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/99 (46%), Positives = 63/99 (63%)
 Frame = -3

Query: 298 PTDLDQAFQTLSVQQLQSNGNWYFDTEATTHLTKDACMLSNYFPSSNSRSICVGNGTSIP 119
           P +L  AF T ++    ++ +WY DT ATTHLT     L + F SS+S S+ VGNG+S+P
Sbjct: 280 PANLAAAFGTTTMPD-PTDASWYMDTGATTHLTAQPGTLHSLFNSSSSPSVVVGNGSSVP 338

Query: 118 IQGSGTNHINLAHRLVPLTNVLYTPNIIKNLISVRQFTK 2
            +  G + +    R + L NVL  P+IIKNL+SVRQFTK
Sbjct: 339 TKAIGYSFLPSKIRPLHLHNVLVCPSIIKNLVSVRQFTK 377


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1597

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -3

Query: 289 LDQAFQTLSVQQLQSNGNWYFDTEATTHLTKDACMLSNYFP--SSNSRSICVGNGTSIPI 116
           L  AF T ++QQ  SN  WY D  AT H+T DAC+LS   P  S +   I +GNG+SIPI
Sbjct: 555 LPGAFNTATLQQPPSN-EWYMDIGATAHMTSDACILSFTHPPTSHDPSHIIIGNGSSIPI 613

Query: 115 QGSGTNHINLAHRLVPLTNVLYTPNIIKNLISVRQF 8
              G  +I   H    L ++L +P IIKNLISVR+F
Sbjct: 614 TSVGHTNIQHKHSTFTLRDILCSPAIIKNLISVRRF 649


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = -3

Query: 289 LDQAFQTLSVQQLQSNGNWYFDTEATTHLTKDACMLS-NYFPSSNSRS-ICVGNGTSIPI 116
           L  AF T+S+ Q  S+ +WY D+ A++H+T DA  LS +  P+ N+ S I VG+G+ +PI
Sbjct: 548 LINAFNTVSLSQPPSS-DWYIDSGASSHMTSDAGTLSFSSQPNPNTPSHIIVGDGSPLPI 606

Query: 115 QGSGTNHINLAHRLVPLTNVLYTPNIIKNLISVRQFTK 2
             +G+ H++  HR   L NVL +P IIKNLI VR+F +
Sbjct: 607 TATGSTHLSFPHRSFVLNNVLVSPEIIKNLIVVRRFAR 644


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 989

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
 Frame = -3

Query: 289 LDQAFQTLSVQQLQSNGNWYFDTEATTHLTKDACMLSNYFPSSNS----RSICVGNGTSI 122
           L   F T+++QQ   N  WYFD+ AT+H+T D+  LS+  P+S+      SI VGNG+ +
Sbjct: 151 LASTFSTMTLQQ-PPNNEWYFDSGATSHMTSDSHTLSH--PTSSRYPTPSSIVVGNGSLL 207

Query: 121 PIQGSGTNHINLAHRLVPLTNVLYTPNIIKNLISVRQFT 5
           PI  +GT  +  +     L NVL +P +IKNLISVRQFT
Sbjct: 208 PITATGTTTLTDS-----LNNVLVSPRLIKNLISVRQFT 241


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 DLDQAFQTLSVQQLQSNGNWYFDTEATTHLTKDA---CMLSNYFPSSNSRSICVGNGTSI 122
           DL +AF T S+Q    +  WY D+ AT +LT  A     LS Y   S  +S+  GNG  I
Sbjct: 264 DLAEAFNTFSLQD-PPDSQWYMDSGATAYLTSGAGNNLQLSLY--PSIGKSVIFGNGGCI 320

Query: 121 PIQGSGTNHINLAHRLVPLTNVLYTPNIIKNLISVRQFTK 2
           P+  +G+  I    R + L NVL TP+IIKNL+SVR+FTK
Sbjct: 321 PVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTK 360