BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043531
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi...   363   2e-98
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   360   2e-97
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   357   2e-96
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   353   3e-95

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  379 bits (974), Expect = e-103
 Identities = 185/282 (65%), Positives = 228/282 (80%), Gaps = 8/282 (2%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
            SV+PA VHCEAF +KES+HGY VKLGF  D YV+NALMD+YSRMGK+DIS  IFDSME++
Sbjct: 405  SVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR 464

Query: 643  DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDD--ENTANDVKKVTRKPNSITLMTV 470
            D VSWNTMITGYV+ G + +AL LLH+M + + T D  ++  +D K    KPN+ITLMTV
Sbjct: 465  DRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTV 524

Query: 469  LPGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNV 290
            LPGC      AKGKEIHAYA+RN+LASD+ VGSAL DMYAKCGCLNL+ RVF+ MP +NV
Sbjct: 525  LPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNV 584

Query: 289  ITWNVMFMAYGMHGKGDVALSLFESMVA------DVKPNEVTFISLFAACSHSGMVNEGR 128
            ITWNV+ MA GMHGKG+ AL LF++MVA      + KPNEVTFI++FAACSHSG+++EG 
Sbjct: 585  ITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGL 644

Query: 127  SLFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            +LF+RMK ++GV PT DHY CVVDLLGRAG L+EA++L+N+M
Sbjct: 645  NLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 686



 Score =  129 bits (323), Expect = 1e-27
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYVVC 599
           + +HGY +++G  +  +  NALM +Y+++G+VD S+ +F+S   +D VSWNTMI+ +   
Sbjct: 217 KQLHGYSLRVGDQKT-FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS 275

Query: 598 GSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXAKGKEIH 419
                AL     M       D                +T+ +VLP C        GKEIH
Sbjct: 276 DRFSEALAFFRLMVLEGVELD---------------GVTIASVLPACSHLERLDVGKEIH 320

Query: 418 AYAVRNL-LASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMHGKG 242
           AY +RN  L  +  VGSAL DMY  C  +    RVFD +  R +  WN M   Y  +G  
Sbjct: 321 AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD 380

Query: 241 DVALSLFESM--VADVKPNEVTFISLFAACSHSGMVNEGRSLFHRMKDEYGVNPTEDHY- 71
           + AL LF  M  VA + PN  T  S+  AC H    +   S+ H    + G    ED Y 
Sbjct: 381 EKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESI-HGYAVKLGFK--EDRYV 437

Query: 70  -GCVVDLLGRAGHLDEAHKLINSM 2
              ++D+  R G +D +  + +SM
Sbjct: 438 QNALMDMYSRMGKMDISETIFDSM 461



 Score =  115 bits (287), Expect = 2e-23
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 20/294 (6%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLG-FARDGYVRNALMDLYSRMGKVDISRNIFDSMEI 647
            SVLPA  H E     + +H YV++      + +V +AL+D+Y    +V+  R +FD +  
Sbjct: 302  SVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILG 361

Query: 646  KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVL 467
            +    WN MI+GY   G  E AL L  +M              +K     PN+ T+ +V+
Sbjct: 362  RRIELWNAMISGYARNGLDEKALILFIEM--------------IKVAGLLPNTTTMASVM 407

Query: 466  PGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVI 287
            P C      +  + IH YAV+     D  V +AL DMY++ G ++++  +FD M VR+ +
Sbjct: 408  PACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRV 467

Query: 286  TWNVMFMAYGMHGKGDVALSLFESM-----VADV-------------KPNEVTFISLFAA 161
            +WN M   Y + G+   AL L   M       DV             KPN +T +++   
Sbjct: 468  SWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPG 527

Query: 160  CSHSGMVNEGRSLF-HRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            C+    + +G+ +  + +++    + T      +VD+  + G L+ + ++ N M
Sbjct: 528  CAALAAIAKGKEIHAYAIRNMLASDITVG--SALVDMYAKCGCLNLSRRVFNEM 579



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 5/239 (2%)
 Frame = -3

Query: 823 SVLPASVHCEAFRDKESMHGYVVKLGFARDGY-VRNALMDLYSRMGKVDISRNIFDSMEI 647
           +VL A    +  +  E +H   VK G+      V N L+++Y + G +     +FD +  
Sbjct: 97  AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD 156

Query: 646 KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVL 467
           +D VSWN+ I         E AL+    M   +                + +S TL++V 
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMEN---------------MELSSFTLVSVA 201

Query: 466 PGC---XXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVR 296
             C           GK++H Y++R +        +AL  MYAK G ++ +  +F+    R
Sbjct: 202 LACSNLGVMHGLRLGKQLHGYSLR-VGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDR 260

Query: 295 NVITWNVMFMAYGMHGKGDVALSLFESMVAD-VKPNEVTFISLFAACSHSGMVNEGRSL 122
           ++++WN M  ++    +   AL+ F  MV + V+ + VT  S+  ACSH   ++ G+ +
Sbjct: 261 DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = -3

Query: 499 KPNSITLMTVLPGCXXXXXXAKGKEIHAYAVR-NLLASDVAVGSALTDMYAKCGCLNLAS 323
           +P++     VL           G++IHA AV+    +S V V + L +MY KCG +    
Sbjct: 89  RPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVC 148

Query: 322 RVFDMMPVRNVITWNVMFMAYGMHGKGDVALSLFESM-VADVKPNEVTFISLFAACSHSG 146
           +VFD +  R+ ++WN    A     K + AL  F +M + +++ +  T +S+  ACS+ G
Sbjct: 149 KVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLG 208

Query: 145 MVN 137
           +++
Sbjct: 209 VMH 211


>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  363 bits (932), Expect = 2e-98
 Identities = 179/284 (63%), Positives = 215/284 (75%), Gaps = 10/284 (3%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
            SVLPA V C+ F DKE +HGY+VK GF +D YV+NALMD+YSRMG+V+IS+ IF  M  +
Sbjct: 642  SVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR 701

Query: 643  DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKK---VTRKPNSITLMT 473
            D VSWNTMITG +VCG ++ AL+LLH+M +R   D  +T  D +    V  KPNS+TLMT
Sbjct: 702  DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMT 761

Query: 472  VLPGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRN 293
            VLPGC       KGKEIHAYAV+  LA DVAVGSAL DMYAKCGCLNLASRVFD MP+RN
Sbjct: 762  VLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRN 821

Query: 292  VITWNVMFMAYGMHGKGDVALSLFESMVAD-------VKPNEVTFISLFAACSHSGMVNE 134
            VITWNV+ MAYGMHGKG+ AL LF  M A        ++PNEVT+I++FAACSHSGMV+E
Sbjct: 822  VITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDE 881

Query: 133  GRSLFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            G  LFH MK  +GV P  DHY C+VDLLGR+G + EA++LIN+M
Sbjct: 882  GLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTM 925



 Score =  111 bits (277), Expect = 2e-22
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 3/262 (1%)
 Frame = -3

Query: 778  ESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYVVC 599
            + +H Y ++ G  R  Y  NAL+ +Y+R+G+V+ ++ +F   + KD VSWNT+I+     
Sbjct: 454  KQVHAYTLRNGDLRT-YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQN 512

Query: 598  GSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXAKGKEIH 419
               E AL  ++ M              V  V  +P+ +TL +VLP C        G+EIH
Sbjct: 513  DRFEEALMYVYLMI-------------VDGV--RPDGVTLASVLPACSQLERLRIGREIH 557

Query: 418  AYAVRN-LLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMHGKG 242
             YA+RN  L  +  VG+AL DMY  C        VFD +  R V  WN +   Y  +   
Sbjct: 558  CYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFD 617

Query: 241  DVALSLFESMVADVK--PNEVTFISLFAACSHSGMVNEGRSLFHRMKDEYGVNPTEDHYG 68
            D AL LF  M+++ +  PN  TF S+  AC    + ++   + H    + G    +    
Sbjct: 618  DQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI-HGYIVKRGFGKDKYVQN 676

Query: 67   CVVDLLGRAGHLDEAHKLINSM 2
             ++D+  R G ++ +  +   M
Sbjct: 677  ALMDMYSRMGRVEISKTIFGRM 698



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 24/298 (8%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLG-FARDGYVRNALMDLYSRMGKVDISRNIFDSMEI 647
            SVLPA    E  R    +H Y ++ G    + +V  AL+D+Y    +    R +FD +  
Sbjct: 539  SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598

Query: 646  KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRK---PNSITLM 476
            +    WN ++ GY                  R+E DD+     V+ ++     PN+ T  
Sbjct: 599  RTVAVWNALLAGYA-----------------RNEFDDQALRLFVEMISESEFCPNATTFA 641

Query: 475  TVLPGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVR 296
            +VLP C      +  + IH Y V+     D  V +AL DMY++ G + ++  +F  M  R
Sbjct: 642  SVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR 701

Query: 295  NVITWNVMFMAYGMHGKGDVALSLFESMV-------------------ADVKPNEVTFIS 173
            ++++WN M     + G+ D AL+L   M                       KPN VT ++
Sbjct: 702  DIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMT 761

Query: 172  LFAACSHSGMVNEGRSLF-HRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            +   C+    + +G+ +  + +K +  ++        +VD+  + G L+ A ++ + M
Sbjct: 762  VLPGCAALAALGKGKEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQM 817



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGYVR--NALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYV 605
           + +H +V K G A    V   N+L+++Y + G +  +R +FD +  +D VSWN+MI    
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIA--T 407

Query: 604 VCGSHEHALDL-LHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXAK-G 431
           +C   E  L L L ++   +  D              P S TL++V   C       + G
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVD--------------PTSFTLVSVAHACSHVRGGVRLG 453

Query: 430 KEIHAYAVRNLLASDVA--VGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYG 257
           K++HAY +RN    D+     +AL  MYA+ G +N A  +F +   +++++WN +  +  
Sbjct: 454 KQVHAYTLRN---GDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510

Query: 256 MHGKGDVALSLFESMVAD-VKPNEVTFISLFAACSHSGMVNEGRSL 122
            + + + AL     M+ D V+P+ VT  S+  ACS    +  GR +
Sbjct: 511 QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREI 556



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
 Frame = -3

Query: 580 LDLLHKMTKRDETDDE-NTANDVKKVTRKPNSITLMTVLPGCXXXXXXAKGKEIHAYAVR 404
           +DLL   T      D  +T   +      P++     VL           GK+IHA+  +
Sbjct: 299 IDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFK 358

Query: 403 --NLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMHGKGDVAL 230
             +   S VAV ++L +MY KCG L  A +VFD +P R+ ++WN M        + +++L
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418

Query: 229 SLFESMVAD-VKPNEVTFISLFAACSH-SGMVNEGRSLFHRMKDEYGVNPTEDHYGCVVD 56
            LF  M+++ V P   T +S+  ACSH  G V  G+ + H      G   T  +   +V 
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQV-HAYTLRNGDLRTYTN-NALVT 476

Query: 55  LLGRAGHLDEAHKL 14
           +  R G +++A  L
Sbjct: 477 MYARLGRVNDAKAL 490


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
            predicted protein [Populus trichocarpa]
          Length = 814

 Score =  360 bits (925), Expect = 2e-97
 Identities = 177/281 (62%), Positives = 215/281 (76%), Gaps = 7/281 (2%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
            S++PA V CE    KE +HGYV+K G   + Y++NAL+D+YSRMG +  S+ IFDSME +
Sbjct: 324  SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 643  DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDD-ENTANDVKKVTRKPNSITLMTVL 467
            D VSWNT+IT YV+CG    AL LLH+M + +E    +   ND K+V  KPNSITLMTVL
Sbjct: 384  DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443

Query: 466  PGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVI 287
            PGC      AKGKEIHAYA+RNLLAS V VGSAL DMYAKCGCLNLA RVFD MP+RNVI
Sbjct: 444  PGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503

Query: 286  TWNVMFMAYGMHGKGDVALSLFESMVA------DVKPNEVTFISLFAACSHSGMVNEGRS 125
            TWNV+ MAYGMHGKG  +L LFE MVA      +VKP EVTFI+LFA+CSHSGMV+EG S
Sbjct: 504  TWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLS 563

Query: 124  LFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            LFH+MK+E+G+ P  DHY C+VDL+GRAG ++EA+ L+N+M
Sbjct: 564  LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTM 604



 Score =  102 bits (255), Expect = 8e-20
 Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 19/293 (6%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLG-FARDGYVRNALMDLYSRMGKVDISRNIFDSMEI 647
            SVLPA  H +  R  + +H Y ++      + +V +AL+D+Y   G+V+  R +FDS+  
Sbjct: 221  SVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280

Query: 646  KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVL 467
            +    WN MI GY      E AL L  +M        E  A          N+ T+ +++
Sbjct: 281  RKIGLWNAMIAGYAQSEHDEKALMLFIEM--------EAAAGLYS------NATTMSSIV 326

Query: 466  PGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVI 287
            P        ++ + IH Y ++  L ++  + +AL DMY++ G +  + R+FD M  R+++
Sbjct: 327  PAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIV 386

Query: 286  TWNVMFMAYGMHGKGDVALSLFESM-----------------VADVKPNEVTFISLFAAC 158
            +WN +  +Y + G+   AL L   M                     KPN +T +++   C
Sbjct: 387  SWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGC 446

Query: 157  SHSGMVNEGRSLF-HRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            +    + +G+ +  + +++      T      +VD+  + G L+ A ++ + M
Sbjct: 447  ASLSALAKGKEIHAYAIRNLLASQVTVG--SALVDMYAKCGCLNLARRVFDQM 497



 Score =  102 bits (253), Expect = 1e-19
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYVVC 599
           + +HG   + G  R  +  NALM +Y+++G++D ++++    E +D V+WN+MI+ +   
Sbjct: 136 KQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQN 194

Query: 598 GSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXAKGKEIH 419
                AL  L  M                    KP+ +T  +VLP C        GKEIH
Sbjct: 195 ERFMEALMFLRLMVLEGV---------------KPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 418 AYAVR-NLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMHGKG 242
           AYA+R + +  +  VGSAL DMY  CG +     VFD +  R +  WN M   Y      
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 241 DVALSLFESM--VADVKPNEVTFISLFAACSHSGMVNEGRSLFHRMKDEYGVNPTEDHYG 68
           + AL LF  M   A +  N  T  S+  A      ++    + H    + G+        
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGI-HGYVIKRGLETNRYLQN 358

Query: 67  CVVDLLGRAGHLDEAHKLINSM 2
            ++D+  R G +  + ++ +SM
Sbjct: 359 ALIDMYSRMGDIKTSKRIFDSM 380



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGYVR--NALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYV 605
           + +H +V K G+     V   N L+++Y + G +  +  +FD +  +D VSWN++I+   
Sbjct: 30  KQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALC 89

Query: 604 VCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGC---XXXXXXAK 434
                E A+     M                    +P+S TL+++   C           
Sbjct: 90  RFEEWEVAIKAFRLMLMEG---------------FEPSSFTLVSMALACSNLRKRDGLWL 134

Query: 433 GKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGM 254
           GK+IH    R       +  +AL  MYAK G L+ A  +  +   R+++TWN M  ++  
Sbjct: 135 GKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQ 193

Query: 253 HGKGDVALSLFESMVAD-VKPNEVTFISLFAACSHSGMVNEGRSL 122
           + +   AL     MV + VKP+ VTF S+  ACSH  ++  G+ +
Sbjct: 194 NERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = -3

Query: 496 PNSITLMTVLPGCXXXXXXAKGKEIHAYAVRNLLAS--DVAVGSALTDMYAKCGCLNLAS 323
           P++     VL           GK+IHA+  +    S   V + + L +MY KCG L  A 
Sbjct: 8   PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67

Query: 322 RVFDMMPVRNVITWNVMFMAYGMHGKGDVALSLFESMVAD-VKPNEVTFISLFAACSH 152
           +VFD +  R+ ++WN +  A     + +VA+  F  M+ +  +P+  T +S+  ACS+
Sbjct: 68  KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  357 bits (915), Expect = 2e-96
 Identities = 175/280 (62%), Positives = 216/280 (77%), Gaps = 6/280 (2%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
            S++PAS  CE+F  KES+HGYV+K    RD YV+NALMD+YSRM K++IS+ IFDSME++
Sbjct: 390  SIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVR 449

Query: 643  DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLP 464
            D VSWNTMITGYV+ G +  AL +LH+M   +E  +++  +  K+   KPNSITLMTVLP
Sbjct: 450  DIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGD--KQACFKPNSITLMTVLP 507

Query: 463  GCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVIT 284
            GC      AKGKEIHAYAVRN LAS+V VGSAL DMYAKCGCLNL+ RVFD MP++NVIT
Sbjct: 508  GCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVIT 567

Query: 283  WNVMFMAYGMHGKGDVALSLFESMVA------DVKPNEVTFISLFAACSHSGMVNEGRSL 122
            WNV+ MAYGMHG G+ AL LF+ MVA      +VKP EVT I++ AACSHSGMV+EG  L
Sbjct: 568  WNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKL 627

Query: 121  FHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
            FHRMKD++G+ P  DHY CV DLLGRAG +++A+  IN+M
Sbjct: 628  FHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINTM 667



 Score =  109 bits (273), Expect = 6e-22
 Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
 Frame = -3

Query: 796 EAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMI 617
           E  R  + +HGY  + G     +  NALM +Y+ +G++D ++ +F   E ++ +SWNTMI
Sbjct: 196 EGLRLGKQIHGYCFRNGHWST-FTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMI 254

Query: 616 TGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXA 437
           + +        AL  L  M                    KP+ +TL +VLP C       
Sbjct: 255 SSFSQNERFVEALMSLRYMVLEGV---------------KPDGVTLASVLPACSYLEMLG 299

Query: 436 KGKEIHAYAVRN-LLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAY 260
            GKEIHAYA+R+  L  +  VGSAL DMY  CG +    RVFD +  R    WN M   Y
Sbjct: 300 TGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGY 359

Query: 259 GMHGKGDVALSLFESM--VADVKPNEVTFISLFAA 161
             +   + AL LF  M  VA + PN  T  S+  A
Sbjct: 360 AQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPA 394



 Score =  107 bits (266), Expect = 4e-21
 Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 15/289 (5%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLG-FARDGYVRNALMDLYSRMGKVDISRNIFDSMEI 647
            SVLPA  + E     + +H Y ++ G    + +V +AL+D+Y   G+V   R +FD +  
Sbjct: 287  SVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILE 346

Query: 646  KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVL 467
            + T  WN MI GY      E AL L  +M              V      PN+ T+ +++
Sbjct: 347  RKTGLWNAMIAGYAQNEHDEKALMLFIEM--------------VAVAGLCPNTTTMASIV 392

Query: 466  PGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVI 287
            P           + IH Y ++  L  D  V +AL DMY++   + ++  +FD M VR+++
Sbjct: 393  PASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIV 452

Query: 286  TWNVMFMAYGMHGKGDVALSLFESM--------------VADVKPNEVTFISLFAACSHS 149
            +WN M   Y + G  + AL +   M               A  KPN +T +++   C+  
Sbjct: 453  SWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASL 512

Query: 148  GMVNEGRSLFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
              + +G+ + H       +         +VD+  + G L+ + ++ + M
Sbjct: 513  AALAKGKEI-HAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQM 560



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGY-VRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYVV 602
           + +H +VVK G+      + N+L++ Y +  ++D    +FD +  +D VSWN++I+ +  
Sbjct: 97  KQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCR 156

Query: 601 CGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGC---XXXXXXAKG 431
               E AL+    M   D                +P+S TL++ +  C           G
Sbjct: 157 AQEWELALEAFRFMLAED---------------LEPSSFTLVSPVIACSNLRKHEGLRLG 201

Query: 430 KEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMH 251
           K+IH Y  RN   S     +AL  MYA  G L+ A  +F +   RN+I+WN M  ++  +
Sbjct: 202 KQIHGYCFRNGHWS-TFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQN 260

Query: 250 GKGDVALSLFESMVAD-VKPNEVTFISLFAACSHSGMVNEGRSL 122
            +   AL     MV + VKP+ VT  S+  ACS+  M+  G+ +
Sbjct: 261 ERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEI 304



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = -3

Query: 496 PNSITLMTVLPGCXXXXXXAKGKEIHAYAVR-NLLASDVAVGSALTDMYAKCGCLNLASR 320
           P+S     VL           GK+IHA+ V+    +S VA+ ++L + Y KC  L+   +
Sbjct: 75  PDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYK 134

Query: 319 VFDMMPVRNVITWNVMFMAYGMHGKGDVALSLFESMVA-DVKPNEVTFISLFAACSH 152
           VFD +  R++++WN +  A+    + ++AL  F  M+A D++P+  T +S   ACS+
Sbjct: 135 VFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSN 191


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 874

 Score =  353 bits (905), Expect = 3e-95
 Identities = 173/283 (61%), Positives = 214/283 (75%), Gaps = 9/283 (3%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
            SVLPA V CE+F DKE +H  VVK GF +D YV+NALMD+YSRMG+++I+R+IF SM  K
Sbjct: 395  SVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK 454

Query: 643  DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDV---KKVTRKPNSITLMT 473
            D VSWNTMITGYVVCG H+ AL+LLH M +       NT +D    K    KPNS+TLMT
Sbjct: 455  DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMT 514

Query: 472  VLPGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRN 293
            VLPGC       KGKEIHAYAV+ +L+ DVAVGSAL DMYAKCGCLNL+  VF+ M VRN
Sbjct: 515  VLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRN 574

Query: 292  VITWNVMFMAYGMHGKGDVALSLFESMV------ADVKPNEVTFISLFAACSHSGMVNEG 131
            VITWNV+ MAYGMHGKG+ AL LF  MV       +++PNEVT+I++FA+ SHSGMV+EG
Sbjct: 575  VITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEG 634

Query: 130  RSLFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
             +LF+ MK ++G+ PT DHY C+VDLLGR+G ++EA+ LI +M
Sbjct: 635  LNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTM 677



 Score =  114 bits (285), Expect = 3e-23
 Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 5/264 (1%)
 Frame = -3

Query: 778 ESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIKDTVSWNTMITGYVVC 599
           + +H +V++ G  R  +  NAL+ +Y+++G+V  ++ +FD  + KD VSWNT+I+     
Sbjct: 207 KQVHAFVLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQN 265

Query: 598 GSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLPGCXXXXXXAKGKEIH 419
              E AL  LH M +                  +PN +TL +VLP C        GKEIH
Sbjct: 266 DRFEEALLYLHVMLQSGV---------------RPNGVTLASVLPACSHLEMLGCGKEIH 310

Query: 418 AYA-VRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVITWNVMFMAYGMHGKG 242
           A+  + N L  +  VG AL DMY  C        VFD M  R +  WN M   Y  +   
Sbjct: 311 AFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFD 370

Query: 241 DVALSLFESMVAD--VKPNEVTFISLFAAC--SHSGMVNEGRSLFHRMKDEYGVNPTEDH 74
             A+ LF  MV +  + PN VT  S+  AC    S +  EG    H    ++G    +  
Sbjct: 371 YEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG---IHSCVVKWGFEKDKYV 427

Query: 73  YGCVVDLLGRAGHLDEAHKLINSM 2
              ++D+  R G ++ A  +  SM
Sbjct: 428 QNALMDMYSRMGRIEIARSIFGSM 451



 Score =  101 bits (252), Expect = 2e-19
 Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 20/294 (6%)
 Frame = -3

Query: 823  SVLPASVHCEAFRDKESMHGYVVKLG-FARDGYVRNALMDLYSRMGKVDISRNIFDSMEI 647
            SVLPA  H E     + +H +V+       + +V  AL+D+Y    + +  R +FD M  
Sbjct: 292  SVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR 351

Query: 646  KDTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVL 467
            +    WN MI GYV       A++L  +M              V ++   PNS+TL +VL
Sbjct: 352  RTIAVWNAMIAGYVRNEFDYEAIELFVEM--------------VFELGLSPNSVTLSSVL 397

Query: 466  PGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRVFDMMPVRNVI 287
            P C         + IH+  V+     D  V +AL DMY++ G + +A  +F  M  ++++
Sbjct: 398  PACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIV 457

Query: 286  TWNVMFMAYGMHGKGDVALSLFESMVA-------------------DVKPNEVTFISLFA 164
            +WN M   Y + G+ D AL+L   M                      +KPN VT +++  
Sbjct: 458  SWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLP 517

Query: 163  ACSHSGMVNEGRSLFHRMKDEYGVNPTEDHYGCVVDLLGRAGHLDEAHKLINSM 2
             C+    + +G+ + H    +  ++        +VD+  + G L+ +  +   M
Sbjct: 518  GCAALAALGKGKEI-HAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570



 Score =  100 bits (249), Expect = 4e-19
 Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
 Frame = -3

Query: 823 SVLPASVHCEAFRDKESMHGYVVKLGFARDGYVRNALMDLYSRMGKVDISRNIFDSMEIK 644
           +VL A+   +     + +H +V K G A    V N+L+++Y + G +D +R +FD +  +
Sbjct: 90  AVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNR 149

Query: 643 DTVSWNTMITGYVVCGSHEHALDLLHKMTKRDETDDENTANDVKKVTRKPNSITLMTVLP 464
           D VSWN+MI         E A+ L   M        EN           P S TL++V  
Sbjct: 150 DDVSWNSMINAACRFEEWELAVHLFRLMLL------ENVG---------PTSFTLVSVAH 194

Query: 463 GC-XXXXXXAKGKEIHAYAVRNLLASD--VAVGSALTDMYAKCGCLNLASRVFDMMPVRN 293
            C         GK++HA+ +RN    D      +AL  MYAK G +  A  +FD+   ++
Sbjct: 195 ACSNLINGLLLGKQVHAFVLRN---GDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKD 251

Query: 292 VITWNVMFMAYGMHGKGDVALSLFESMV-ADVKPNEVTFISLFAACSHSGMVNEGRSL 122
           +++WN +  +   + + + AL     M+ + V+PN VT  S+  ACSH  M+  G+ +
Sbjct: 252 LVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEI 309



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = -3

Query: 496 PNSITLMTVLPGCXXXXXXAKGKEIHAYAVRNLLASDVAVGSALTDMYAKCGCLNLASRV 317
           P++     VL           GK++HA+  +   A   AV ++L +MY KCG ++ A RV
Sbjct: 83  PDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRV 142

Query: 316 FDMMPVRNVITWNVMFMAYGMHGKGDVALSLFESMVAD-VKPNEVTFISLFAACSH 152
           FD +  R+ ++WN M  A     + ++A+ LF  M+ + V P   T +S+  ACS+
Sbjct: 143 FDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSN 198