BLASTX nr result

ID: Atractylodes21_contig00043478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043478
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   150   2e-34
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              150   2e-34
ref|XP_002535134.1| conserved hypothetical protein [Ricinus comm...   131   7e-29
ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   121   7e-26
ref|XP_004161150.1| PREDICTED: pre-mRNA-processing factor 39-lik...   113   2e-23

>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  150 bits (379), Expect = 2e-34
 Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 12/196 (6%)
 Frame = -2

Query: 581  DLLIAGIQQVPHSRLLLEELINFAMMHEGSRHLNVVDSIIATAITCGSDGSQGLSSKDRE 402
            D+LI GI+ VP S++LLEELI FAMMH G RH+NVVD+++A AI+ G+D SQGLS+KD E
Sbjct: 488  DVLIDGIRCVPESKMLLEELIKFAMMHGGPRHINVVDAVVANAISPGTDVSQGLSAKDGE 547

Query: 401  DLSYLYLKFVDYCGTTHDIRKAWDRHIKSFPHLIRSTSSHKYPSNQLSNELEDVRERMPR 222
             +S LYL+FVD CGT +D++KAW+RHIK FPH +R+ S +KYP+   S  L    E  P 
Sbjct: 548  YISRLYLEFVDLCGTIYDVKKAWNRHIKLFPHCLRTMSIYKYPATS-SKPLRIAMEGRPD 606

Query: 221  LVAKQPS---GVRSIKHIAQI-------SANENHKLLMS--TNQAIEPHEATANQYRGKD 78
            ++A  P    G     H+A I       S  ENH +      N  +EP  A  +   G  
Sbjct: 607  IIAAMPCHPFGDSGSDHLALIPIEEQGLSCPENHDIHSEQVVNVQLEPEAANKSAQEGL- 665

Query: 77   DDNSVKENNPFQHSED 30
                V    P QH E+
Sbjct: 666  --QLVIPKVPGQHREE 679


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  150 bits (379), Expect = 2e-34
 Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 12/196 (6%)
 Frame = -2

Query: 581  DLLIAGIQQVPHSRLLLEELINFAMMHEGSRHLNVVDSIIATAITCGSDGSQGLSSKDRE 402
            D+LI GI+ VP S++LLEELI FAMMH G RH+NVVD+++A AI+ G+D SQGLS+KD E
Sbjct: 443  DVLIDGIRCVPESKMLLEELIKFAMMHGGPRHINVVDAVVANAISPGTDVSQGLSAKDGE 502

Query: 401  DLSYLYLKFVDYCGTTHDIRKAWDRHIKSFPHLIRSTSSHKYPSNQLSNELEDVRERMPR 222
             +S LYL+FVD CGT +D++KAW+RHIK FPH +R+ S +KYP+   S  L    E  P 
Sbjct: 503  YISRLYLEFVDLCGTIYDVKKAWNRHIKLFPHCLRTMSIYKYPATS-SKPLRIAMEGRPD 561

Query: 221  LVAKQPS---GVRSIKHIAQI-------SANENHKLLMS--TNQAIEPHEATANQYRGKD 78
            ++A  P    G     H+A I       S  ENH +      N  +EP  A  +   G  
Sbjct: 562  IIAAMPCHPFGDSGSDHLALIPIEEQGLSCPENHDIHSEQVVNVQLEPEAANKSAQEGL- 620

Query: 77   DDNSVKENNPFQHSED 30
                V    P QH E+
Sbjct: 621  --QLVIPKVPGQHREE 634


>ref|XP_002535134.1| conserved hypothetical protein [Ricinus communis]
           gi|223523950|gb|EEF27249.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 663

 Score =  131 bits (330), Expect = 7e-29
 Identities = 74/163 (45%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
 Frame = -2

Query: 581 DLLIAGIQQVPHSRLLLEELINFAMMHEGSRHLNVVDSIIATAITCGSDGSQGLSSKDRE 402
           D+LI GI+ VPH +LL+EELI FA  H GSRH+NV+D+I+A AI+ G+  SQGLS+KD E
Sbjct: 100 DILIDGIKHVPHCKLLIEELIKFATTHGGSRHMNVIDTIVANAISPGTSVSQGLSTKDGE 159

Query: 401 DLSYLYLKFVDYCGTTHDIRKAWDRHIKSFPHLIRSTSSHKYPSN---QLSNELEDVRER 231
           D+S LYL+FVD CGT +D+RKAW RH+K FP   R+   H        ++  E E+    
Sbjct: 160 DISRLYLEFVDLCGTVNDVRKAWHRHVKLFPSTARTALFHPAMGTTQWKIDMEEEETLVN 219

Query: 230 MPRLVAKQPSGVRSIKHIAQISANENHKLLMSTNQAIEPHEAT 102
           +P     Q SG  S   + Q S  E        N     H AT
Sbjct: 220 LPH----QLSGDSSSHCLIQSSLEEKKLSSPQINDTQVAHPAT 258


>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 1215

 Score =  121 bits (304), Expect = 7e-26
 Identities = 61/131 (46%), Positives = 92/131 (70%), Gaps = 5/131 (3%)
 Frame = -2

Query: 578 LLIAGIQQVPHSRLLLEELINFAMMHEGSRHLNVVDSIIATAITCGSDGSQGLSSKDRED 399
           +LI GI+ +P ++LLLEEL+ F+MMH G++H++ +DSIIA AI+  ++GSQGLS++D ED
Sbjct: 477 VLIDGIRTLPQNKLLLEELMKFSMMHGGAKHIDELDSIIAGAISPRANGSQGLSAEDAED 536

Query: 398 LSYLYLKFVDYCGTTHDIRKAWDRHIKSFP-----HLIRSTSSHKYPSNQLSNELEDVRE 234
           +S LYL+FVDYCGT HD+R+A +RHI+  P      L + +   K P N + ++ E++  
Sbjct: 537 ISNLYLEFVDYCGTIHDVRRALNRHIRLCPGSARIDLRQQSIKSKRPLNLIKDKREEISV 596

Query: 233 RMPRLVAKQPS 201
            MP    + PS
Sbjct: 597 AMPNQEPRDPS 607


>ref|XP_004161150.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 564

 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
 Frame = -2

Query: 581 DLLIAGIQQVPHSRLLLEELINFAMMHEGSRHLNVVDSIIATAITCGSDGSQGLSSKDRE 402
           ++LI GI+ VP  +LLLEELINF M+H   + +N+VD I+A AI+  +D SQG S +DRE
Sbjct: 132 EVLIDGIRNVPLCKLLLEELINFVMVHGVPKLINLVDPIVANAISLKADVSQGWSEQDRE 191

Query: 401 DLSYLYLKFVDYCGTTHDIRKAWDRHIKSFPHLIRSTS-SHKYPSNQLSNELEDVRERMP 225
           D+S LYLK VD CGT HD+ K W+RHIK FP  IR+       P  +   +    ++   
Sbjct: 192 DISTLYLKAVDLCGTIHDVMKVWNRHIKLFPQSIRAMPYKDPIPGIEAIKKTMGGKQTAD 251

Query: 224 RLVAKQPSGVRSIKHIAQISANENHKLLMSTNQAIEPHEATANQ 93
             V  QP    ++    Q    EN + L+          +  N+
Sbjct: 252 STVTNQPIRDDNVNPSNQPPLEENKESLLDNQNFKNDQSSNGNE 295


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