BLASTX nr result

ID: Atractylodes21_contig00043441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043441
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   128   4e-28
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   124   1e-26
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   100   2e-19
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    80   2e-13

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/147 (42%), Positives = 94/147 (63%), Gaps = 11/147 (7%)
 Frame = +2

Query: 17  FSGYDPRGWISKAELYFEIHGTPSHLRTRLAQLCMIDVA*HWFTI-----------QLTR 163
           F G DP  WI++AE+YF++  T   +R +LA+L M     HWF +            L R
Sbjct: 79  FDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKR 138

Query: 164 ELLQRFGGLEIQNPYEQLSTIQQVSSIYDYIDDFEYLLSLVPRLPESQALGYFLAGLRPE 343
            L+ R+GG  ++NP+E+LST++Q  S+ ++++ FE L S V RLPE Q LGYF++GL+P+
Sbjct: 139 ALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQ 198

Query: 344 IKRWARLHRPQTRLDAMYLAKDVEELL 424
           I+R  R   P+ R++ M +AKDVE+ L
Sbjct: 199 IRRRVRTLNPRNRMEMMRIAKDVEDEL 225


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 11/148 (7%)
 Frame = +2

Query: 17   FSGYDPRGWISKAELYFEIHGTPSHLRTRLAQLCMIDVA*HWFTI-----------QLTR 163
            F G DP  WI++AE+YF++  TP  +R +L++L M     HWF +           +L +
Sbjct: 752  FEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKK 811

Query: 164  ELLQRFGGLEIQNPYEQLSTIQQVSSIYDYIDDFEYLLSLVPRLPESQALGYFLAGLRPE 343
             L+ R+ G  ++NP+E+LST++Q+ S+ ++++ FE L S V RLPE Q LGYF++GL+  
Sbjct: 812  ALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAH 871

Query: 344  IKRWARLHRPQTRLDAMYLAKDVEELLH 427
            I+R  R   P TR+  M +AKDVE+ L+
Sbjct: 872  IRRRVRTLNPTTRMQMMRIAKDVEDELN 899


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
 Frame = +2

Query: 17  FSGYDPRGWISKAELYFEIHGTPSHLRTRLAQLCMIDVA*HWFTI-----------QLTR 163
           F G D   WI++ E+YF++  T   +R +LA+L M     HWF +           +L R
Sbjct: 62  FEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKR 121

Query: 164 ELLQRFGGLEIQNPYEQLSTIQQVSSIYDYIDDFEYLLSLVPRLPESQALGYFLAGLRPE 343
            L+ R+GG  ++NP+E+LSTI+Q  S+ ++++ FE L S V RLPE Q LGYF++GL+P+
Sbjct: 122 ALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQ 181

Query: 344 IKRWARLHRPQTRLDAMYLAKDVEELL 424
           I+R  R   P  R+  M +AKDVEE L
Sbjct: 182 IRRRVRTLNPLNRMQMMRIAKDVEEEL 208


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
 Frame = +2

Query: 17  FSGYDPRGWISKAELYFEIHGTPSHLRTRLAQLCMIDVA*HWFTIQLTRE---------- 166
           F+G DP GWI++AE+YF +  T   ++  LAQLCM     H+F   L             
Sbjct: 89  FNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKD 148

Query: 167 -LLQRFGGLEIQNPYEQLSTIQQVSSIYDYIDDFEYLLSLVPRLPESQALGYFLAGLRPE 343
            LL+R+GG+   N +EQLS +QQ  +I +YI DFE L++ +P+LP  Q LGYF+ GL+ +
Sbjct: 149 ALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDK 208

Query: 344 IK 349
           I+
Sbjct: 209 IR 210


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
 Frame = +2

Query: 17  FSGYDPRGWISKAELYFEIHGTPSHLRTRLAQLCMIDVA*HWFTI-----------QLTR 163
           F+G DP GWI KAE YF+        + +LA   +  +A  W              + T+
Sbjct: 90  FNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQWHRWLTKFRGPLTWDEFTK 149

Query: 164 ELLQRFGGLEIQNPYEQLSTIQQVSSIYDYIDDFEYLLSLVPRLPESQALGYFLAGLRPE 343
            +  RFG  + ++P E L+ ++Q +++  Y + FE L   V  LPE+  +G F+AGL+ E
Sbjct: 150 AVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEAFEKLSHRVDGLPENFLIGCFIAGLQDE 209

Query: 344 IKRWARLHRPQTRLDAMYLAKDVEELLHPTKNLTLNARYRYAS 472
           I+   ++ +P+T  D + +A+ +EE     +  T   R++ AS
Sbjct: 210 IRIDVKIKQPRTLADTIGVARLIEERNQLQRKPTQQTRFQPAS 252


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