BLASTX nr result

ID: Atractylodes21_contig00043344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043344
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ric...    63   3e-08
ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...    62   4e-08
ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 hom...    59   4e-07
gb|AGG19192.1| maternal effect embryo arrest 21, partial [Dimoca...    57   2e-06
ref|NP_181004.2| PIN domain-containing MEE21 protein [Arabidopsi...    57   2e-06

>ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ricinus communis]
           gi|223530289|gb|EEF32186.1| rRNA-processing protein
           UTP23, putative [Ricinus communis]
          Length = 290

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = +2

Query: 8   KKNAAKRKTDVKDKVQFKRKKAKGPNPLSCKKKKNE 115
           KK++A+ KTDVKD+ QFKRK+AKGPNPLSCKKKK +
Sbjct: 205 KKHSARNKTDVKDRPQFKRKRAKGPNPLSCKKKKKD 240


>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
           gi|296082256|emb|CBI21261.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11  KNAAKRKTDVKDKVQFKRKKAKGPNPLSCKKKKNENQKHVA-KKEGNENVETI 166
           +N AKR+  VKD+VQFKR KAKGPNPLSCKKKK++ Q + A +KE  +  +T+
Sbjct: 212 ENNAKRRMVVKDRVQFKRNKAKGPNPLSCKKKKSQRQPNPASEKEDKDAGKTV 264


>ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +2

Query: 20  AKRKTDVKDKVQFKRKKAKGPNPLSCKKKKNENQKHVAKKEGNEN 154
           ++ + ++KD+ QFKRK+AKGPNPLSCKKKK+E Q     KE NE+
Sbjct: 218 SRNRMEIKDEPQFKRKRAKGPNPLSCKKKKSEKQNIGPLKETNED 262


>gb|AGG19192.1| maternal effect embryo arrest 21, partial [Dimocarpus longan]
           gi|456722991|gb|AGG38109.1| maternal effect embryo
           arrest 21 protein [Dimocarpus longan]
          Length = 285

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +2

Query: 8   KKNAAKRKTDVKDKVQFKRKKAKGPNPLSCKKK-KNENQKHVAKKEGNENVETI 166
           KK+  +++  VKD  QFKRKKAKGPNPLSCKKK   EN   V+ KE  +   T+
Sbjct: 211 KKDNTRKQLGVKDGPQFKRKKAKGPNPLSCKKKTSRENPNMVSGKESKDGDNTM 264


>ref|NP_181004.2| PIN domain-containing MEE21 protein [Arabidopsis thaliana]
           gi|21805693|gb|AAM76754.1| hypothetical protein
           [Arabidopsis thaliana] gi|61742637|gb|AAX55139.1|
           hypothetical protein At2g34570 [Arabidopsis thaliana]
           gi|330253898|gb|AEC08992.1| PIN domain-containing MEE21
           protein [Arabidopsis thaliana]
          Length = 281

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 17  AAKRKTDVKDKVQFKRKKAKGPNPLSCKKKKNENQKHVAKKEGNENVE 160
           + K    VKD+ QFKR +AKGPNPLSC KKK EN +  +K + N N +
Sbjct: 205 STKNGLGVKDRPQFKRNRAKGPNPLSCMKKKKENPQSKSKADSNSNAQ 252


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