BLASTX nr result

ID: Atractylodes21_contig00043322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043322
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY16669.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    49   7e-08
emb|CAB02230.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...    46   1e-07
gb|ACA84025.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    48   2e-07
gb|AEK34201.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    48   2e-07
gb|AAC35087.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [...    48   2e-07

>gb|AAY16669.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Pachystroma longifolium]
          Length = 465

 Score = 49.3 bits (116), Expect(2) = 7e-08
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 219 GTRK*MMKRRVFARELRVPVAMHDYLTEGF 308
           GT + MMKR VFARELRVP+ MHDYLT GF
Sbjct: 235 GTCEEMMKRAVFARELRVPIVMHDYLTGGF 264



 Score = 32.0 bits (71), Expect(2) = 7e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 313 FPANSSLAHYCQDNG 357
           F AN+SLAHYC+DNG
Sbjct: 264 FTANTSLAHYCRDNG 278


>emb|CAB02230.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Foetidia asymetrica]
          Length = 459

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +3

Query: 219 GTRK*MMKRRVFARELRVPVAMHDYLTEGF 308
           GT + M+KR VFAREL VP+ MHDYLT GF
Sbjct: 236 GTSEEMIKRAVFARELGVPIVMHDYLTGGF 265



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 313 FPANSSLAHYCQDNG 357
           FPAN+SLAHYC+DNG
Sbjct: 265 FPANTSLAHYCRDNG 279


>gb|ACA84025.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Hedyosmum spectabile] gi|347547009|gb|AEP03558.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial (chloroplast) [Hedyosmum spectabile]
          Length = 465

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = +3

Query: 219 GTRK*MMKRRVFARELRVPVAMHDYLTEGF 308
           GT K MMKR VFAREL VP+ MHDYLT GF
Sbjct: 235 GTCKEMMKRAVFARELGVPIVMHDYLTGGF 264



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 313 FPANSSLAHYCQDNG 357
           F AN+SLAHYC+DNG
Sbjct: 264 FTANTSLAHYCRDNG 278


>gb|AEK34201.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Lamium galeobdolon]
          Length = 453

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +3

Query: 219 GTRK*MMKRRVFARELRVPVAMHDYLTEGF 308
           GTR+ M+KR VFAREL VP+ MHDYLT GF
Sbjct: 230 GTREEMIKRAVFARELGVPIVMHDYLTGGF 259



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 313 FPANSSLAHYCQDNG 357
           F AN+SLAHYC+DNG
Sbjct: 259 FTANTSLAHYCRDNG 273


>gb|AAC35087.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [Galeandra
           devoniana]
          Length = 447

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 219 GTRK*MMKRRVFARELRVPVAMHDYLTEGF 308
           GT + MMKR VFAREL VP+AMHDYLT GF
Sbjct: 236 GTCEEMMKRAVFARELGVPIAMHDYLTGGF 265



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 313 FPANSSLAHYCQDNG 357
           F AN+SLAHYC+DNG
Sbjct: 265 FTANTSLAHYCRDNG 279


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