BLASTX nr result

ID: Atractylodes21_contig00043246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043246
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...    62   4e-08
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]            62   6e-08
ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cu...    61   1e-07
gb|EIE22441.1| importin alpha [Coccomyxa subellipsoidea C-169]         61   1e-07
gb|AAT08686.1| karyopherin alpha [Hyacinthus orientalis]               61   1e-07

>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/68 (48%), Positives = 45/68 (66%)
 Frame = -3

Query: 474 KIEFQRVWALTKVAY*TFKHTTGVLDQGVVPIFVILLALASNDVWEQALGMLGNVVVEPY 295
           +++F+  WALT +A  T +HT  V+D G VPIFV LLA  S+DV EQA+  LGNV  +  
Sbjct: 131 QLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSP 190

Query: 294 SGCDIVFR 271
           +  D+V R
Sbjct: 191 TCRDLVLR 198


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = -3

Query: 474 KIEFQRVWALTKVAY*TFKHTTGVLDQGVVPIFVILLALASNDVWEQALGMLGNVVVEPY 295
           +++F+  WALT VA  T +HT  V+D G VP+FV LL+ AS+DV EQA+  LGNV  +  
Sbjct: 135 QLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSASDDVREQAVWALGNVAGDSP 194

Query: 294 SGCDIV 277
           S  D+V
Sbjct: 195 SCRDLV 200


>ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449490806|ref|XP_004158712.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 537

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = -3

Query: 474 KIEFQRVWALTKVAY*TFKHTTGVLDQGVVPIFVILLALASNDVWEQALGMLGNVVVEPY 295
           +++F+  WALT +A  T +HT  V+D G VPIFV LL+  S+DV EQA+  LGNV  +  
Sbjct: 134 QLQFEAAWALTNIASGTSEHTRVVIDHGAVPIFVQLLSSGSDDVREQAVWALGNVAGDSP 193

Query: 294 SGCDIV 277
           S  D+V
Sbjct: 194 SCRDLV 199


>gb|EIE22441.1| importin alpha [Coccomyxa subellipsoidea C-169]
          Length = 536

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/86 (44%), Positives = 51/86 (59%)
 Frame = -3

Query: 471 IEFQRVWALTKVAY*TFKHTTGVLDQGVVPIFVILLALASNDVWEQALGMLGNVVVEPYS 292
           ++F+  WALT VA  T  HT  V++ G VPIFV LL+  S+DV EQA+  LGN+  +   
Sbjct: 129 LQFEAAWALTNVASGTSDHTRVVIESGAVPIFVALLSSPSDDVREQAVWALGNIAGDSAK 188

Query: 291 GCDIVFRIEEKVLWLPLLEVVKSGGK 214
             D+V  +E   L  PLLE +K   K
Sbjct: 189 CRDLV--LEHGALG-PLLEQLKDNTK 211


>gb|AAT08686.1| karyopherin alpha [Hyacinthus orientalis]
          Length = 277

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -3

Query: 501 KDDSSDGVVKIEFQRVWALTKVAY*TFKHTTGVLDQGVVPIFVILLALASNDVWEQALGM 322
           +DD SD    ++F+  WALT +A  T +HT  V+D G VP+FV LL   S+DV EQA+  
Sbjct: 137 RDDFSD----LQFEAAWALTNIASGTSEHTKVVIDHGAVPVFVRLLGSPSDDVREQAVWA 192

Query: 321 LGNVVVEPYSGCDIV 277
           LGNV  +     D+V
Sbjct: 193 LGNVAGDSSQCRDLV 207


Top