BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043211
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
emb|CBI36298.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_003597874.1| Pentatricopeptide repeat-containing protein ...    92   4e-17

>ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = -2

Query: 427 SKSLLSSITPRHSRNSKSPSNITSRIKKIVNEIHHILTTRNTH-WEETLETRLSEEDIVP 251
           SK++LS I PRH R   S S++  RI  +V+++  IL T  TH W++ LE+R +E  +V 
Sbjct: 2   SKAILSRIKPRH-RPKGSSSSLPPRINHLVSDVIQILRTSKTHQWQDPLESRFAESKVVV 60

Query: 250 SDVAHQVFDKTRDVESALKFFDWISQRPYGCPLDGVXXXXXXXXXXXXXAFPEIDSVFIR 71
           SDVAH V D+  D E  LKFFDW S RP+ C LDGV              FPEI+ V   
Sbjct: 61  SDVAHFVIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLEN 120

Query: 70  MKNENELPTDDALNDVIRAYSE 5
           MK ++  PT +A + +I AY+E
Sbjct: 121 MKAQHLKPTREAFSALILAYAE 142


>ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/141 (41%), Positives = 82/141 (58%)
 Frame = -2

Query: 427 SKSLLSSITPRHSRNSKSPSNITSRIKKIVNEIHHILTTRNTHWEETLETRLSEEDIVPS 248
           SK+ LS I PR  ++ K  S++  RI  +V+++  IL T    W+++LE+R +E  +V S
Sbjct: 2   SKATLSRIKPR--QHPKGSSSLPPRINYLVSDVIRILKTHQ--WQDSLESRFAESKVVVS 57

Query: 247 DVAHQVFDKTRDVESALKFFDWISQRPYGCPLDGVXXXXXXXXXXXXXAFPEIDSVFIRM 68
           DVAH V D+  D E ALKFFDW S RP+ C LDGV              FPEI+ V   M
Sbjct: 58  DVAHFVIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENM 117

Query: 67  KNENELPTDDALNDVIRAYSE 5
           K ++  PT +A + +I AY E
Sbjct: 118 KAQHLKPTREAFSALILAYGE 138


>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/141 (39%), Positives = 79/141 (56%)
 Frame = -2

Query: 427 SKSLLSSITPRHSRNSKSPSNITSRIKKIVNEIHHILTTRNTHWEETLETRLSEEDIVPS 248
           SK+LL  I  +      S  ++  RI  +V +I  +L T N  WEE L+TR SE +++ S
Sbjct: 2   SKTLLCLIKSKAKPTPPSKPSLKPRINNLVKDILEVLHTHN-QWEENLQTRFSESEVLAS 60

Query: 247 DVAHQVFDKTRDVESALKFFDWISQRPYGCPLDGVXXXXXXXXXXXXXAFPEIDSVFIRM 68
           DVAH V D+ RDVE  LKFFDW+S+  Y  P++G               F E++ V   M
Sbjct: 61  DVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENM 120

Query: 67  KNENELPTDDALNDVIRAYSE 5
           + E   PT +A++ VI+AYS+
Sbjct: 121 RVEEMSPTREAMSIVIQAYSD 141


>emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/141 (39%), Positives = 79/141 (56%)
 Frame = -2

Query: 427 SKSLLSSITPRHSRNSKSPSNITSRIKKIVNEIHHILTTRNTHWEETLETRLSEEDIVPS 248
           SK+LL  I  +      S  ++  RI  +V +I  +L T N  WEE L+TR SE +++ S
Sbjct: 2   SKTLLCLIKSKAKPTPPSKPSLKPRINNLVKDILEVLHTHN-QWEENLQTRFSESEVLAS 60

Query: 247 DVAHQVFDKTRDVESALKFFDWISQRPYGCPLDGVXXXXXXXXXXXXXAFPEIDSVFIRM 68
           DVAH V D+ RDVE  LKFFDW+S+  Y  P++G               F E++ V   M
Sbjct: 61  DVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENM 120

Query: 67  KNENELPTDDALNDVIRAYSE 5
           + E   PT +A++ VI+AYS+
Sbjct: 121 RVEEMSPTREAMSIVIQAYSD 141


>ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359582|gb|ABD28711.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486922|gb|AES68125.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 822

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/141 (36%), Positives = 75/141 (53%)
 Frame = -2

Query: 427 SKSLLSSITPRHSRNSKSPSNITSRIKKIVNEIHHILTTRNTHWEETLETRLSEEDIVPS 248
           SKS+LS I P H     S S++   IK +++++  IL T  +H   +L++R +E  I+ S
Sbjct: 2   SKSILSLIKPHHHPKPSSSSSLPPHIKTLIHDVIQILKTNQSH--HSLQSRFAESQIIVS 59

Query: 247 DVAHQVFDKTRDVESALKFFDWISQRPYGCPLDGVXXXXXXXXXXXXXAFPEIDSVFIRM 68
           +VAH V D+  + +  L FF W S  P+  PL+ V              F EI+ V   M
Sbjct: 60  NVAHFVIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDM 119

Query: 67  KNENELPTDDALNDVIRAYSE 5
           KN N  PT +ALN VI  Y+E
Sbjct: 120 KNRNFKPTLEALNSVICVYAE 140