BLASTX nr result

ID: Atractylodes21_contig00043183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043183
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216...    71   3e-18
ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    71   3e-18
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    73   3e-16
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    70   5e-15
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    84   1e-14

>ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216505 [Cucumis sativus]
          Length = 907

 Score = 70.9 bits (172), Expect(2) = 3e-18
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +2

Query: 188 LLTSFGVHRSNLALMFCDNKPAL*IALNPTFHERTNRMEIDCHFTSEKVIAKLIRLMPIW 367
           LL    +     A+++C+N+ A+ IA NP FHERT  +E+DCHF  ++V  + I+L+PI 
Sbjct: 646 LLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIELDCHFVRDRVTDESIKLLPIR 705

Query: 368 SNFHLADMFTKPL 406
           S   LAD  TKPL
Sbjct: 706 STHQLADALTKPL 718



 Score = 45.4 bits (106), Expect(2) = 3e-18
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +1

Query: 25  ATRHLLKYFRDSDSGTCPNSRRSITITGFCKFLAHYLIS 141
           A  HLL+Y +D+D G+CP++RRS   TGFC FL   L+S
Sbjct: 576 AANHLLRYIKDADWGSCPDTRRS--DTGFCVFLGKSLVS 612


>ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229082 [Cucumis sativus]
          Length = 802

 Score = 70.9 bits (172), Expect(2) = 3e-18
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +2

Query: 188 LLTSFGVHRSNLALMFCDNKPAL*IALNPTFHERTNRMEIDCHFTSEKVIAKLIRLMPIW 367
           LL    +     A+++C+N+ A+ IA NP FHERT  +E+DCHF  ++V  + I+L+PI 
Sbjct: 277 LLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIELDCHFVRDRVTDESIKLLPIR 336

Query: 368 SNFHLADMFTKPL 406
           S   LAD  TKPL
Sbjct: 337 STHQLADALTKPL 349



 Score = 45.4 bits (106), Expect(2) = 3e-18
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +1

Query: 25  ATRHLLKYFRDSDSGTCPNSRRSITITGFCKFLAHYLIS 141
           A  HLL+Y +D+D G+CP++RRS   TGFC FL   L+S
Sbjct: 207 AANHLLRYIKDADWGSCPDTRRS--DTGFCVFLGKSLVS 243


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 72.8 bits (177), Expect(2) = 3e-16
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
 Frame = +2

Query: 182  IQLLTSFGVHRSNLALMFCDNKPAL*IALNPTFHERTNRMEIDCHFTSEKVIAKLIRLMP 361
            + LL  FG+  S  AL+FCDN+ AL +A NP FHERT  +EIDCH   +KV + +++ M 
Sbjct: 1193 LALLKDFGIDHSAPALLFCDNQSALHMAENPVFHERTKHIEIDCHLVRDKVQSGVLKPMF 1252

Query: 362  IWSNFHLADMFTKPL--PYFKLL 424
            + +   LAD  TK L    FKLL
Sbjct: 1253 VSTEHQLADXLTKALHPSSFKLL 1275



 Score = 37.0 bits (84), Expect(2) = 3e-16
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +1

Query: 40   LKYFRDSDSGTCPNSRRSITITGFCKFLAHYLIS 141
            L  + DSD   CP+SRRS  +TGFC FL + L+S
Sbjct: 1130 LMAYTDSDWARCPDSRRS--VTGFCVFLGNSLVS 1161


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 69.7 bits (169), Expect(2) = 5e-15
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +2

Query: 185  QLLTSFGVHRSNLALMFCDNKPAL*IALNPTFHERTNRMEIDCHFTSEKVIAKLIRLMPI 364
            QLL    V  +  A +FCDNK AL +A NP FHERT  +EIDCH   +++ A  ++ + +
Sbjct: 1343 QLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHV 1402

Query: 365  WSNFHLADMFTKPL---PYFKLLPRM 433
             +   LAD+ TKPL   P+  LL R+
Sbjct: 1403 PTGNQLADILTKPLHPGPFHSLLKRI 1428



 Score = 35.8 bits (81), Expect(2) = 5e-15
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
 Frame = +1

Query: 10   DAYL*ATRHLLKYFR-----DSDSGTCPNSRRSITITGFCKFLAHYLIS 141
            D ++ A   +L+Y +     D+D GTC +SRRS  +TGFC +L   LI+
Sbjct: 1264 DIHMQAAHKVLRYLKGNPGQDADWGTCKDSRRS--VTGFCIYLGTSLIT 1310


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/99 (41%), Positives = 61/99 (61%)
 Frame = +2

Query: 113  VNFLLTISYRRDLTRVQGYRLLQIQLLTSFGVHRSNLALMFCDNKPAL*IALNPTFHERT 292
            VN +  +  +R L +V GY L++   +            +FCDN+ A+ IA NPTFHERT
Sbjct: 1718 VNEVRDLMLQRGLNKVPGYSLVETNAVXLMPT------TVFCDNQAAIAIASNPTFHERT 1771

Query: 293  NRMEIDCHFTSEKVIAKLIRLMPIWSNFHLADMFTKPLP 409
              +EIDCHF  +K++   ++++PI ++  LADMFTK LP
Sbjct: 1772 KHIEIDCHFVRDKIVEGFLKVLPINTSLQLADMFTKALP 1810


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