BLASTX nr result

ID: Atractylodes21_contig00043164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043164
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   102   3e-20
ref|XP_003610097.1| Protein VERNALIZATION INSENSITIVE [Medicago ...   102   3e-20
gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]     102   4e-20
ref|XP_002531036.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    99   3e-19

>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score =  102 bits (255), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 56/80 (70%)
 Frame = -2

Query: 242 RGTKRQRKTDHPNDLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCSC 63
           R +KRQRK DHP+ L ++ ++  I   D D        CKN ACRA LS+E  FCKRCSC
Sbjct: 108 RTSKRQRKADHPSRLPVAANNHSISNGDGD--LGNAIYCKNLACRANLSREYEFCKRCSC 165

Query: 62  CICHQYDDNKDPSLWLICSS 3
           CICHQYDDNKDPSLWL CSS
Sbjct: 166 CICHQYDDNKDPSLWLTCSS 185


>ref|XP_003610097.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]
           gi|355511152|gb|AES92294.1| Protein VERNALIZATION
           INSENSITIVE [Medicago truncatula]
          Length = 730

 Score =  102 bits (255), Expect = 3e-20
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = -2

Query: 233 KRQRKTDHPNDLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCSCCIC 54
           KRQRK ++P+ L  ++ ++ + + +       T  CKNSAC+A L+Q DAFCKRCSCCIC
Sbjct: 109 KRQRKIENPSRL--AVPENNVFVNNSGDVNHNTSYCKNSACKATLNQGDAFCKRCSCCIC 166

Query: 53  HQYDDNKDPSLWLICSS 3
           HQYDDNKDPSLWLICSS
Sbjct: 167 HQYDDNKDPSLWLICSS 183


>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/80 (58%), Positives = 56/80 (70%)
 Frame = -2

Query: 242 RGTKRQRKTDHPNDLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCSC 63
           R +KRQRK +HP+   I  + S     + + + +    CKN ACRAKLS +DAFCKRCSC
Sbjct: 105 RSSKRQRKAEHPSRFPIEANTS--STTNTNVSLANVVYCKNLACRAKLSGQDAFCKRCSC 162

Query: 62  CICHQYDDNKDPSLWLICSS 3
           CIC  YDDNKDPSLWLICSS
Sbjct: 163 CICRNYDDNKDPSLWLICSS 182


>ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis]
           gi|223529389|gb|EEF31353.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/80 (58%), Positives = 57/80 (71%)
 Frame = -2

Query: 242 RGTKRQRKTDHPNDLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCSC 63
           R +KRQRK D+P+ L + ++ +       D A      CKNSACRA L Q+DAFCKRCSC
Sbjct: 84  RSSKRQRKIDNPSRLTVPVNYTATSNAGNDLA--NVIYCKNSACRATLKQDDAFCKRCSC 141

Query: 62  CICHQYDDNKDPSLWLICSS 3
           CIC++YDDNKDPSLWL CSS
Sbjct: 142 CICYKYDDNKDPSLWLTCSS 161


>ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 736

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = -2

Query: 233 KRQRKTDHPNDLNISMDDSLIHIVDCDPAYSETKLCKNSACRAKLSQEDAFCKRCSCCIC 54
           KRQRK+++P+  +I +  + + + +   + + T  CKNSAC+A L+Q DAFCKRCSCCIC
Sbjct: 109 KRQRKSENPS--HIPVPATSVPVNNGGDSINTT-FCKNSACKATLNQSDAFCKRCSCCIC 165

Query: 53  HQYDDNKDPSLWLICSS 3
           HQYDDNKDPSLWLICSS
Sbjct: 166 HQYDDNKDPSLWLICSS 182


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