BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043141
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc...    56   3e-06

>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 927

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11  PVICLLGRVPIAMGVGLDPEK-FSVLGWTWHKNVKEVRGFLGLASYHR*YVKSFSI 175
           P +  LG V    G+ +DP K  S++GW    NVK+VR FLG+A Y+R +VK FSI
Sbjct: 379 PEVAFLGHVINQQGISVDPSKVLSIVGWERSTNVKDVRSFLGMAGYYRRFVKDFSI 434