BLASTX nr result

ID: Atractylodes21_contig00043127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043127
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus c...   104   7e-21
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI16457.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...    97   1e-18
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]    97   1e-18

>ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus communis]
            gi|223532465|gb|EEF34256.1| hypothetical protein
            RCOM_0146510 [Ricinus communis]
          Length = 1050

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/114 (48%), Positives = 76/114 (66%)
 Frame = +2

Query: 2    LSNEKVRLACCRALLILGGRISFSGKVITEDWILKNAGFFDRPESDVQDNKITIKDDFLP 181
            L++EKV    CRALL LGGR S SGK +TE W+LK AGF    E +  +      D F  
Sbjct: 866  LTDEKVCEKTCRALLALGGRFSASGKSLTESWVLKQAGFNKIYELNSHEEDSLCDDSFSL 925

Query: 182  DNDEKEAVEDWLIKLTASLLGDGKKSFLDSLSQCLSSGHRDMTKAGLITVAWFS 343
            + +E E   +WL  L+ASLLG+GKKSFL+++S+CL+SG+ ++ +A L T+AW S
Sbjct: 926  EGEE-ETTNEWLRNLSASLLGNGKKSFLEAISKCLASGNLNLIEACLATIAWLS 978


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
            predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/114 (47%), Positives = 76/114 (66%)
 Frame = +2

Query: 2    LSNEKVRLACCRALLILGGRISFSGKVITEDWILKNAGFFDRPESDVQDNKITIKDDFLP 181
            L++EKVR   CRAL +LGG  S SG   TE WILK AGF    E + +++ + + D   P
Sbjct: 958  LTDEKVREQSCRALNVLGGIFSASGNSSTESWILKQAGFDKNHEVNSREDNLLLDDPLSP 1017

Query: 182  DNDEKEAVEDWLIKLTASLLGDGKKSFLDSLSQCLSSGHRDMTKAGLITVAWFS 343
            + DE+E+ E+WL  L+ SLL +GK S L+++S+CLSSG  D+ +A L T+AW S
Sbjct: 1018 E-DEEESSEEWLRNLSESLLANGKMSILETISKCLSSGILDLVRACLTTIAWLS 1070


>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
 Frame = +2

Query: 2    LSNEKVRLACCRALLILGGRISFSGKVITEDWILKNAGFFDRPESDVQDNKIT--IKDDF 175
            L++E VR  CCRALLIL G  SFSG V TE WILK AG  D  +    +N+    + D  
Sbjct: 880  LTDENVREKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGT 939

Query: 176  LPDNDEKEAVEDWLIKLTASLLGDGKKSFLDSLSQCLSSGHRDMTKAGLITVAWFS 343
            +  + E++A E+W   L+A LLG+G+KSFL+++S+CL S   ++ +  L TVAW S
Sbjct: 940  ISLDAEEQAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSSELVRVCLTTVAWLS 995


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1148

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
 Frame = +2

Query: 2    LSNEKVRLACCRALLILGGRISFSGKVITEDWILKNAGFFDRPESDVQDNKIT--IKDDF 175
            L++E VR  CCRALLIL G  SFSG V TE WILK AG  D  +    +N+    + D  
Sbjct: 944  LTDENVREKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGT 1003

Query: 176  LPDNDEKEAVEDWLIKLTASLLGDGKKSFLDSLSQCLSSGHRDMTKAGLITVAWFS 343
            +  + E++A E+W   L+A LLG+G+KSFL+++S+CL S   ++ +  L TVAW S
Sbjct: 1004 ISLDAEEQAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSSELVRVCLTTVAWLS 1059


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
 Frame = +2

Query: 2    LSNEKVRLACCRALLILGGRISFSGKVITEDWILKNAGFFDRPESDVQDNKIT--IKDDF 175
            L++E VR  CCRALLIL G  SFSG V TE WILK AG  D  +    +N+    + D  
Sbjct: 944  LTDENVREKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGT 1003

Query: 176  LPDNDEKEAVEDWLIKLTASLLGDGKKSFLDSLSQCLSSGHRDMTKAGLITVAWFS 343
            +  + E++A E+W   L+A LLG+G+KSFL+++S+CL S   ++ +  L TVAW S
Sbjct: 1004 ISLDAEEQAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSXELVRVCLTTVAWLS 1059


Top