BLASTX nr result

ID: Atractylodes21_contig00043122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043122
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    71   1e-10
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    70   2e-10
ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208...    69   5e-10
ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219...    67   1e-09
ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232...    67   2e-09

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/46 (67%), Positives = 40/46 (86%)
 Frame = -3

Query: 196 RRLSDKELQSRRQQGLCYRCDEKYAPGHRCKKKELSVLVMPDDEGE 59
           RRLS+KELQ +R+ GLC+RCDEK+A GHRCKKKELS+L+  ++E E
Sbjct: 335 RRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEE 380


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = -3

Query: 220 STAGIPPFRRLSDKELQSRRQQGLCYRCDEKYAPGHRCKKKELSVLVMPDDEGESPHEAS 41
           S+ G    RRL++KELQ +R +GLC++CDEK+  GH+C++KELSVL M D+E +    A 
Sbjct: 393 SSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGAL 452

Query: 40  GHAE 29
             +E
Sbjct: 453 SGSE 456


>ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
          Length = 1969

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = -3

Query: 205 PPFRRLSDKELQSRRQQGLCYRCDEKYAPGHRCKKKELSVLVMPDD 68
           PPFRR +D ELQ+RR + LCYRCDE ++ GHRCK KEL + ++ DD
Sbjct: 855 PPFRRWTDSELQARRDKDLCYRCDEPFSEGHRCKNKELRLYLVADD 900


>ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219643 [Cucumis sativus]
          Length = 648

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
 Frame = -3

Query: 205 PPFRRLSDKELQSRRQQGLCYRCDEKYAPGHRCK---KKELSVLVMPDDEGESPHE 47
           PP +RLSD E ++R  +GLC+RC+EKYAPGHRCK   K+EL +L++ ++E     E
Sbjct: 293 PPIKRLSDTEFRARLDKGLCFRCNEKYAPGHRCKGREKRELMLLILNEEEDHKREE 348


>ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
          Length = 701

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
 Frame = -3

Query: 205 PPFRRLSDKELQSRRQQGLCYRCDEKYAPGHRCK---KKELSVLVMPDDEGESPHEASGH 35
           PP +RLSD E ++R  +GLC+RC+EKY+PGHRCK   K+EL +L++ ++E    HE   +
Sbjct: 210 PPIKRLSDTEFRARLDKGLCFRCNEKYSPGHRCKGREKRELMLLILNEEE---DHERESN 266

Query: 34  AE 29
            E
Sbjct: 267 TE 268


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